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HEMK1 HemK methyltransferase family member 1 [ Gallus gallus (chicken) ]

Gene ID: 415915, updated on 17-Aug-2024

Summary

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Symbol
HEMK1provided by CGNC
Full Name
HemK methyltransferase family member 1provided by CGNC
Primary source
CGNC:1610
See related
Ensembl:ENSGALG00010028140
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 12
Exon count:
13
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 12 NC_052543.1 (1847096..1930905)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 12 NC_052584.1 (1885029..1968839)

Chromosome 12 - NC_052543.1Genomic Context describing neighboring genes Neighboring gene high mobility group protein HMGI-C-like Neighboring gene C3orf18 homolog Neighboring gene cytokine inducible SH2 containing protein Neighboring gene MAPK activated protein kinase 3 Neighboring gene uncharacterized LOC124417166

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables S-adenosylmethionine-dependent methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein methylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hemK methyltransferase family member 1; MTRF1L release factor glutamine methyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052543.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    1847096..1930905
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025154564.3 → XP_025010332.1  MTRF1L release factor glutamine methyltransferase isoform X1

    UniProtKB/TrEMBL
    E1BTM2
    Conserved Domains (1) summary
    TIGR03534
    Location:72 → 345
    RF_mod_PrmC; protein-(glutamine-N5) methyltransferase, release factor-specific

  2. XM_025154563.3 → XP_025010331.1  MTRF1L release factor glutamine methyltransferase isoform X1

    UniProtKB/TrEMBL
    E1BTM2
    Related
    ENSGALP00010041931.1, ENSGALT00010068188.1
    Conserved Domains (1) summary
    TIGR03534
    Location:72 → 345
    RF_mod_PrmC; protein-(glutamine-N5) methyltransferase, release factor-specific

  3. XM_025154562.3 → XP_025010330.1  MTRF1L release factor glutamine methyltransferase isoform X1

    UniProtKB/TrEMBL
    E1BTM2
    Conserved Domains (1) summary
    TIGR03534
    Location:72 → 345
    RF_mod_PrmC; protein-(glutamine-N5) methyltransferase, release factor-specific

  4. XM_046900120.1 → XP_046756076.1  MTRF1L release factor glutamine methyltransferase isoform X3

  5. XM_046900119.1 → XP_046756075.1  MTRF1L release factor glutamine methyltransferase isoform X3

  6. XM_025154565.3 → XP_025010333.2  MTRF1L release factor glutamine methyltransferase isoform X2

    Conserved Domains (1) summary
    TIGR03534
    Location:1 → 229
    RF_mod_PrmC; protein-(glutamine-N5) methyltransferase, release factor-specific

  7. XM_040646474.2 → XP_040502408.1  MTRF1L release factor glutamine methyltransferase isoform X3

    Conserved Domains (1) summary
    cl17173
    Location:68 → 242
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...

  8. XM_414261.7 → XP_414261.2  MTRF1L release factor glutamine methyltransferase isoform X1

    See identical proteins and their annotated locations for XP_414261.2

    UniProtKB/TrEMBL
    E1BTM2
    Conserved Domains (1) summary
    TIGR03534
    Location:72 → 345
    RF_mod_PrmC; protein-(glutamine-N5) methyltransferase, release factor-specific

  9. XM_046900122.1 → XP_046756078.1  MTRF1L release factor glutamine methyltransferase isoform X5

  10. XM_046900121.1 → XP_046756077.1  MTRF1L release factor glutamine methyltransferase isoform X4

RNA

  1. XR_005839300.2 RNA Sequence

  2. XR_006931352.1 RNA Sequence

  3. XR_006931353.1 RNA Sequence

  4. XR_006931351.1 RNA Sequence

  5. XR_006931350.1 RNA Sequence

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052584.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    1885029..1968839
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040681754.2 → XP_040537688.1  MTRF1L release factor glutamine methyltransferase isoform X1

    Conserved Domains (1) summary
    TIGR03534
    Location:72 → 345
    RF_mod_PrmC; protein-(glutamine-N5) methyltransferase, release factor-specific

  2. XM_040681755.2 → XP_040537689.1  MTRF1L release factor glutamine methyltransferase isoform X1

    Conserved Domains (1) summary
    TIGR03534
    Location:72 → 345
    RF_mod_PrmC; protein-(glutamine-N5) methyltransferase, release factor-specific

  3. XM_046926504.1 → XP_046782460.1  MTRF1L release factor glutamine methyltransferase isoform X1

  4. XM_040681758.2 → XP_040537692.1  MTRF1L release factor glutamine methyltransferase isoform X1

    Conserved Domains (1) summary
    TIGR03534
    Location:72 → 345
    RF_mod_PrmC; protein-(glutamine-N5) methyltransferase, release factor-specific

  5. XM_040681760.2 → XP_040537694.1  MTRF1L release factor glutamine methyltransferase isoform X2

    Conserved Domains (1) summary
    TIGR03534
    Location:1 → 229
    RF_mod_PrmC; protein-(glutamine-N5) methyltransferase, release factor-specific

  6. XM_040681757.2 → XP_040537691.1  MTRF1L release factor glutamine methyltransferase isoform X1

    Conserved Domains (1) summary
    TIGR03534
    Location:72 → 345
    RF_mod_PrmC; protein-(glutamine-N5) methyltransferase, release factor-specific

RNA

  1. XR_005853533.2 RNA Sequence

  2. XR_006935962.1 RNA Sequence

  3. XR_006935961.1 RNA Sequence

  4. XR_006935963.1 RNA Sequence

  5. XR_006935960.1 RNA Sequence

Nucleotide Protein
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