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MYO1E myosin IE [ Gallus gallus (chicken) ]

Gene ID: 415398, updated on 10-Oct-2024

Summary

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Symbol
MYO1Eprovided by CGNC
Full Name
myosin IEprovided by CGNC
Primary source
CGNC:3042
See related
Ensembl:ENSGALG00010022809
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See MYO1E in Genome Data Viewer
Location:
chromosome: 10
Exon count:
32
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 10 NC_052541.1 (6612167..6832359)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 10 NC_052582.1 (6486723..6707429)

Chromosome 10 - NC_052541.1Genomic Context describing neighboring genes Neighboring gene M-phase phosphoprotein 10 Neighboring gene leucine rich repeat containing 49 Neighboring gene thrombospondin type 1 domain containing 4 Neighboring gene cholinergic receptor nicotinic alpha 7 subunit Neighboring gene family with sequence similarity 81 member A Neighboring gene ring finger protein 111 Neighboring gene cyclin B1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables microfilament motor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin filament organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle transport along actin filament IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in actin cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in microvillus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of myosin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
myosin-Ie; unconventional myosin-Ie

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052541.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    6612167..6832359
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_413782.8 → XP_413782.4  unconventional myosin-Ie isoform X2

    UniProtKB/TrEMBL
    A0A8V0ZXJ8, A0A8V0ZXK6
    Conserved Domains (4) summary
    cd11827
    Location:1080 → 1131
    SH3_MyoIe_If_like; Src homology 3 domain of Myosins Ie, If, and similar proteins
    smart00242
    Location:37 → 715
    MYSc; Myosin. Large ATPases
    cd01378
    Location:56 → 702
    MYSc_Myo1; class I myosin, motor domain
    pfam06017
    Location:742 → 927
    Myosin_TH1; Unconventional myosin tail, actin- and lipid-binding

  2. XM_046899260.1 → XP_046755216.1  unconventional myosin-Ie isoform X2

    UniProtKB/TrEMBL
    A0A8V0ZXK6
    Related
    ENSGALP00010033610.1, ENSGALT00010055492.1

  3. XM_004943766.5 → XP_004943823.2  unconventional myosin-Ie isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZJS7
    Conserved Domains (3) summary
    TIGR01628
    Location:981 → 1109
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd11827
    Location:1142 → 1193
    SH3_MyoIe_If_like; Src homology 3 domain of Myosins Ie, If, and similar proteins
    cd01378
    Location:118 → 764
    MYSc_Myo1; class I myosin, motor domain

  4. XM_046899261.1 → XP_046755217.1  unconventional myosin-Ie isoform X3

    Related
    ENSGALP00010033600.1, ENSGALT00010055478.1

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052582.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    6486723..6707429
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040680641.2 → XP_040536575.1  unconventional myosin-Ie isoform X2

    UniProtKB/TrEMBL
    A0A8V0ZJS7, A0A8V0ZXJ8
    Conserved Domains (3) summary
    TIGR01628
    Location:919 → 1047
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd11827
    Location:1080 → 1131
    SH3_MyoIe_If_like; Src homology 3 domain of Myosins Ie, If, and similar proteins
    cd01378
    Location:56 → 702
    MYSc_Myo1; class I myosin, motor domain

  2. XM_040680640.1 → XP_040536574.1  unconventional myosin-Ie isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZJS7
    Conserved Domains (3) summary
    TIGR01628
    Location:981 → 1109
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd11827
    Location:1142 → 1193
    SH3_MyoIe_If_like; Src homology 3 domain of Myosins Ie, If, and similar proteins
    cd01378
    Location:118 → 764
    MYSc_Myo1; class I myosin, motor domain

  3. XM_046925223.1 → XP_046781179.1  unconventional myosin-Ie isoform X3

Nucleotide Protein
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