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BC048644 cDNA sequence BC048644 [ Mus musculus (house mouse) ]

Gene ID: 407789, updated on 8-Feb-2024


Official Symbol
BC048644provided by MGI
Official Full Name
cDNA sequence BC048644provided by MGI
Primary source
See related
Gene type
RefSeq status
Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Biased expression in testis adult (RPKM 10.8), liver adult (RPKM 9.6) and 2 other tissues See more
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Genomic context

See BC048644 in Genome Data Viewer
8 E1; 8 70.81 cM
Exon count:
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (122634572..122643620)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (121907833..121916881)

Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_22928 Neighboring gene predicted gene, 26812 Neighboring gene STARR-seq mESC enhancer starr_22929 Neighboring gene solute carrier family 7 (cationic amino acid transporter, y+ system), member 5 Neighboring gene STARR-positive B cell enhancer ABC_E9121 Neighboring gene STARR-positive B cell enhancer ABC_E8267 Neighboring gene CapStarr-seq enhancer MGSCv37_chr8:124432414-124432597 Neighboring gene carbonic anhydrase 5a, mitochondrial Neighboring gene predicted gene, 27011 Neighboring gene BTG3 associated nuclear protein Neighboring gene ornithine decarboxylase, structural 1 pseudogene

Genomic regions, transcripts, and products


  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information


Clone Names

  • AC116772.2

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.


  1. NR_167716.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J


  1. NC_000074.7 Reference GRCm39 C57BL/6J

    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001033485.2: Suppressed sequence

    NM_001033485.2: This RefSeq was removed because it is now thought that this gene does not encode a protein.