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ndufb4 NADH:ubiquinone oxidoreductase subunit B4 [ Danio rerio (zebrafish) ]

Gene ID: 406306, updated on 18-Sep-2024

Summary

Official Symbol
ndufb4provided by ZNC
Official Full Name
NADH:ubiquinone oxidoreductase subunit B4provided by ZNC
Primary source
ZFIN:ZDB-GENE-040426-1973
See related
Ensembl:ENSDARG00000019332 AllianceGenome:ZFIN:ZDB-GENE-040426-1973
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
fj49f11; zgc:73370; wu:fj49f10; wu:fj49f11
Summary
Predicted to enable NADH dehydrogenase (ubiquinone) activity. Predicted to be located in mitochondrial inner membrane. Predicted to be integral component of membrane. Is expressed in several structures, including adaxial cell; digestive system; lens; musculature system; and solid lens vesicle. Orthologous to human NDUFB4 (NADH:ubiquinone oxidoreductase subunit B4). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

Location:
chromosome: 24
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 24 NC_007135.7 (23971056..23974490, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 24 NC_007135.6 (23825882..23829316, complement)

Chromosome 24 - NC_007135.7Genomic Context describing neighboring genes Neighboring gene aristaless related homeobox a Neighboring gene homogentisate 1,2-dioxygenase Neighboring gene uncharacterized LOC110439130 Neighboring gene expressed sequence CO360592 Neighboring gene zmp:0000000991

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Pathways from PubChem

General protein information

Preferred Names
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4
Names
NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4
NP_998198.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_213033.1NP_998198.1  NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4

    See identical proteins and their annotated locations for NP_998198.1

    Status: PROVISIONAL

    Source sequence(s)
    BC059680
    UniProtKB/TrEMBL
    A0A8M1PG61, Q6PBK0
    Related
    ENSDARP00000074959.4, ENSDART00000080510.6
    Conserved Domains (1) summary
    pfam07225
    Location:6129
    NDUF_B4; NADH-ubiquinone oxidoreductase B15 subunit (NDUFB4)

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007135.7 Reference GRCz11 Primary Assembly

    Range
    23971056..23974490 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018395176.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    6093..9527 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCz11 ALT_DRER_TU_2

Genomic

  1. NW_018395365.1 Reference GRCz11 ALT_DRER_TU_2

    Range
    6093..9527 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)