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GASAL1 growth arrest associated lncRNA 1 [ Homo sapiens (human) ]

Gene ID: 401472, updated on 1-Jun-2020

Summary

Official Symbol
GASAL1provided by HGNC
Official Full Name
growth arrest associated lncRNA 1provided by HGNC
Primary source
HGNC:HGNC:53461
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
GASL1
Expression
Broad expression in duodenum (RPKM 1.7), small intestine (RPKM 1.5) and 22 other tissues See more

Genomic context

See GASAL1 in Genome Data Viewer
Location:
8q22.3
Exon count:
2
Annotation release Status Assembly Chr Location
109.20200522 current GRCh38.p13 (GCF_000001405.39) 8 NC_000008.11 (102806822..102811214)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101927245 Neighboring gene uncharacterized LOC105375685 Neighboring gene acireductone dioxygenase 1 pseudogene 2 Neighboring gene antizyme inhibitor 1 Neighboring gene macrophage interferon regulatory lncRNA Neighboring gene Sharpr-MPRA regulatory region 791

Genomic regions, transcripts, and products

Genomic Sequence:
NC_000008.11 Chromosome 8 Reference GRCh38.p13 Primary Assembly

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_149020.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AK127183, AP003356

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p13 Primary Assembly

    Range
    102806822..102811214
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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