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LINC01597 long intergenic non-protein coding RNA 1597 [ Homo sapiens (human) ]

Gene ID: 400841, updated on 13-May-2022

Summary

Official Symbol
LINC01597provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 1597provided by HGNC
Primary source
HGNC:HGNC:51594
See related
AllianceGenome:HGNC:51594
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

See LINC01597 in Genome Data Viewer
Location:
20q11.1
Exon count:
2
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 20 NC_000020.11 (30278906..30286537, complement)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 20 NC_060944.1 (30509480..30517111)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 20 NC_000020.10 (29513582..29521213, complement)

Chromosome 20 - NC_000020.11Genomic Context describing neighboring genes Neighboring gene double homeobox 4 like 37 (pseudogene) Neighboring gene CFTR pseudogene 3 Neighboring gene putative uncharacterized protein LOC401522 Neighboring gene uncharacterized LOC105372586

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_145432.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL121762

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000020.11 Reference GRCh38.p14 Primary Assembly

    Range
    30278906..30286537 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060944.1 Alternate T2T-CHM13v2.0

    Range
    30509480..30517111
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_207470.1: Suppressed sequence

    Description
    NM_207470.1: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript and the protein.