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TEX19 testis expressed 19 [ Homo sapiens (human) ]

Gene ID: 400629, updated on 7-Jun-2020

Summary

Official Symbol
TEX19provided by HGNC
Official Full Name
testis expressed 19provided by HGNC
Primary source
HGNC:HGNC:33802
See related
Ensembl:ENSG00000182459 MIM:615647
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Restricted expression toward testis (RPKM 11.9) See more
Orthologs

Genomic context

See TEX19 in Genome Data Viewer
Location:
17q25.3
Exon count:
3
Annotation release Status Assembly Chr Location
109.20200522 current GRCh38.p13 (GCF_000001405.39) 17 NC_000017.11 (82359247..82363776)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (80317123..80321652)

Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene CD7 molecule Neighboring gene secreted and transmembrane 1 Neighboring gene urotensin 2 receptor Neighboring gene 2-oxoglutarate and iron dependent oxygenase domain containing 3 Neighboring gene hexosaminidase D

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

Clone Names

  • FLJ35767

Gene Ontology Provided by GOA

Function Evidence Code Pubs
piRNA binding ISS
Inferred from Sequence or Structural Similarity
more info
 
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
cell differentiation IEA
Inferred from Electronic Annotation
more info
 
male gonad development IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
male meiotic nuclear division ISS
Inferred from Sequence or Structural Similarity
more info
 
negative regulation of transposition IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
negative regulation of transposition IDA
Inferred from Direct Assay
more info
PubMed 
placenta development IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
reciprocal meiotic recombination ISS
Inferred from Sequence or Structural Similarity
more info
 
spermatogenesis IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
spermatogenesis ISS
Inferred from Sequence or Structural Similarity
more info
 
Component Evidence Code Pubs
cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
testis-expressed protein 19
Names
testis-expressed sequence 19 protein

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_207459.4NP_997342.1  testis-expressed protein 19

    See identical proteins and their annotated locations for NP_997342.1

    Status: VALIDATED

    Source sequence(s)
    BC036191, BC057820
    Consensus CDS
    CCDS11809.1
    UniProtKB/Swiss-Prot
    Q8NA77
    Related
    ENSP00000331500.4, ENST00000333437.5
    Conserved Domains (1) summary
    pfam15553
    Location:1159
    TEX19; Testis-expressed protein 19

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000017.11 Reference GRCh38.p13 Primary Assembly

    Range
    82359247..82363776
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017024638.1XP_016880127.1  testis-expressed protein 19 isoform X1

    UniProtKB/Swiss-Prot
    Q8NA77
    Conserved Domains (1) summary
    pfam15553
    Location:1159
    TEX19; Testis-expressed protein 19
  2. XM_017024639.1XP_016880128.1  testis-expressed protein 19 isoform X1

    UniProtKB/Swiss-Prot
    Q8NA77
    Conserved Domains (1) summary
    pfam15553
    Location:1159
    TEX19; Testis-expressed protein 19
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