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ANKRD34C ankyrin repeat domain 34C [ Homo sapiens (human) ]

Gene ID: 390616, updated on 23-Nov-2021

Summary

Official Symbol
ANKRD34Cprovided by HGNC
Official Full Name
ankyrin repeat domain 34Cprovided by HGNC
Primary source
HGNC:HGNC:33888
See related
Ensembl:ENSG00000235711
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
Orthologs
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Genomic context

See ANKRD34C in Genome Data Viewer
Location:
15q25.1
Exon count:
2
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 15 NC_000015.10 (79282722..79298239)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 15 NC_000015.9 (79575064..79590581)

Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene ANKRD34C antisense RNA 1 Neighboring gene microRNA 184 Neighboring gene heterogeneous nuclear ribonucleoprotein C pseudogene 3 Neighboring gene transmembrane p24 trafficking protein 3 Neighboring gene membrane integral NOTCH2 associated receptor 1 Neighboring gene uncharacterized LOC105370918

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • FLJ33346, FLJ45093

General protein information

Preferred Names
ankyrin repeat domain-containing protein 34C

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001146341.2NP_001139813.1  ankyrin repeat domain-containing protein 34C

    See identical proteins and their annotated locations for NP_001139813.1

    Status: VALIDATED

    Source sequence(s)
    AC011797, AK090665, AK127037, AL109678
    Consensus CDS
    CCDS53965.1
    UniProtKB/Swiss-Prot
    P0C6C1
    Related
    ENSP00000401089.2, ENST00000421388.4
    Conserved Domains (3) summary
    cd00204
    Location:32139
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam13637
    Location:46106
    Ank_4; Ankyrin repeats (many copies)
    sd00045
    Location:4382
    ANK; ANK repeat [structural motif]

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000015.10 Reference GRCh38.p13 Primary Assembly

    Range
    79282722..79298239
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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