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SPATA31D1 SPATA31 subfamily D member 1 [ Homo sapiens (human) ]

Gene ID: 389763, updated on 18-May-2019

Summary

Official Symbol
SPATA31D1provided by HGNC
Official Full Name
SPATA31 subfamily D member 1provided by HGNC
Primary source
HGNC:HGNC:37283
See related
Ensembl:ENSG00000214929
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
FAM75D1
Expression
Restricted expression toward testis (RPKM 4.3) See more
Orthologs

Genomic context

See SPATA31D1 in Genome Data Viewer
Location:
9q21.32
Exon count:
5
Annotation release Status Assembly Chr Location
109 current GRCh38.p12 (GCF_000001405.38) 9 NC_000009.12 (81987405..81995256)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (84603687..84610171)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105376108 Neighboring gene SPATA31 subfamily D member 3 Neighboring gene uncharacterized LOC105376107 Neighboring gene SPATA31 subfamily D member 2, pseudogene Neighboring gene SPATA31 subfamily B member 1, pseudogene Neighboring gene DEAD-box helicase 10 pseudogene 2

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General gene information

Homology

Clone Names

  • FLJ46321

Gene Ontology Provided by GOA

Process Evidence Code Pubs
cell differentiation IEA
Inferred from Electronic Annotation
more info
 
spermatogenesis IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
spermatogenesis-associated protein 31D1
Names
FAM75-like protein FLJ46321
family with sequence similarity 75, member D1
protein FAM75D1

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001001670.3NP_001001670.1  spermatogenesis-associated protein 31D1

    See identical proteins and their annotated locations for NP_001001670.1

    Status: VALIDATED

    Source sequence(s)
    AK128831, AL355985
    Consensus CDS
    CCDS47986.1
    UniProtKB/Swiss-Prot
    Q6ZQQ2
    Related
    ENSP00000341988.2, ENST00000344803.2
    Conserved Domains (2) summary
    pfam14650
    Location:484854
    FAM75; FAM75 family
    pfam15371
    Location:69159
    DUF4599; Domain of unknown function (DUF4599)

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p12 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p12 Primary Assembly

    Range
    81987405..81995256
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017014710.2XP_016870199.1  spermatogenesis-associated protein 31D1 isoform X1

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