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Platr26 pluripotency associated transcript 26 [ Mus musculus (house mouse) ]

Gene ID: 381371, updated on 8-Feb-2024

Summary

Official Symbol
Platr26provided by MGI
Official Full Name
pluripotency associated transcript 26provided by MGI
Primary source
MGI:MGI:2686477
See related
Ensembl:ENSMUSG00000064263 AllianceGenome:MGI:2686477
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm1631
Expression
Low expression observed in reference dataset See more
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Genomic context

See Platr26 in Genome Data Viewer
Location:
2 C2; 2 42.79 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (71549761..71561310)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (71719417..71730966)

Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer mm9_chr2:71436893-71437193 Neighboring gene predicted gene, 36857 Neighboring gene STARR-seq mESC enhancer starr_04796 Neighboring gene STARR-seq mESC enhancer starr_04797 Neighboring gene STARR-seq mESC enhancer starr_04798 Neighboring gene STARR-seq mESC enhancer starr_04799 Neighboring gene predicted gene, 36909 Neighboring gene STARR-seq mESC enhancer starr_04800 Neighboring gene STARR-seq mESC enhancer starr_04801 Neighboring gene STARR-seq mESC enhancer starr_04804 Neighboring gene predicted gene, 17250 Neighboring gene ribosomal protein S7 pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_037979.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL928973, AY512918
    Related
    ENSMUST00000079720.6

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000068.8 Reference GRCm39 C57BL/6J

    Range
    71549761..71561310
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_201366.1: Suppressed sequence

    Description
    NM_201366.1: This RefSeq was permanently suppressed because currently there is support for the transcript but not for the protein.