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PICSAR P38 inhibited cutaneous squamous cell carcinoma associated lincRNA [ Homo sapiens (human) ]

Gene ID: 378825, updated on 26-Apr-2021

Summary

Official Symbol
PICSARprovided by HGNC
Official Full Name
P38 inhibited cutaneous squamous cell carcinoma associated lincRNAprovided by HGNC
Primary source
HGNC:HGNC:19725
See related
Ensembl:ENSG00000275874 MIM:617191
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
NLC1C; NLC1-C; PRED74; C21orf113; LINC00162; NCRNA00162
Expression
Biased expression in testis (RPKM 3.3), skin (RPKM 1.4) and 1 other tissue See more
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Genomic context

See PICSAR in Genome Data Viewer
Location:
21q22.3
Exon count:
2
Annotation release Status Assembly Chr Location
109.20210226 current GRCh38.p13 (GCF_000001405.39) 21 NC_000021.9 (44999208..45004727, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 21 NC_000021.8 (46419122..46424642, complement)

Chromosome 21 - NC_000021.9Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 163 Neighboring gene long intergenic non-protein coding RNA 165 Neighboring gene uncharacterized LOC105372836 Neighboring gene uncharacterized LOC105372835 Neighboring gene signal sequence receptor subunit 4 pseudogene 1 Neighboring gene adenosine deaminase RNA specific B1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

General gene information

Other Names

  • long intergenic non-protein coding RNA 162
  • narcolepsy candidate region gene 1C
  • putative narcolepsy candidate region 1 gene C protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_024089.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AP001505, BC027456, CA441515
    Related
    ENST00000615826.1

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20210226

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000021.9 Reference GRCh38.p13 Primary Assembly

    Range
    44999208..45004727 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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