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ANKRD30B ankyrin repeat domain 30B [ Homo sapiens (human) ]

Gene ID: 374860, updated on 14-Dec-2021

Summary

Official Symbol
ANKRD30Bprovided by HGNC
Official Full Name
ankyrin repeat domain 30Bprovided by HGNC
Primary source
HGNC:HGNC:24165
See related
Ensembl:ENSG00000180777 MIM:616565
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
NY-BR-1.1
Expression
Restricted expression toward testis (RPKM 7.9) See more
Orthologs
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Genomic context

See ANKRD30B in Genome Data Viewer
Location:
18p11.21
Exon count:
47
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 18 NC_000018.10 (14748172..14855465)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 18 NC_000018.9 (14748171..14854258)

Chromosome 18 - NC_000018.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105372006 Neighboring gene uncharacterized LOC105372005 Neighboring gene uncharacterized LOC105372007 Neighboring gene uncharacterized LOC105372008 Neighboring gene RNA, U6 small nuclear 1210, pseudogene Neighboring gene microRNA 3156-2 Neighboring gene long intergenic non-protein coding RNA 1906 Neighboring gene fibroblast growth factor 7 pseudogene 1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
ankyrin repeat domain-containing protein 30B
Names
serologically defined breast cancer antigen NY-BR-1.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001367607.2NP_001354536.1  ankyrin repeat domain-containing protein 30B

    Status: VALIDATED

    Source sequence(s)
    AP005121, AP006507, AP006564, AP006565
    Related
    ENSP00000510074.1, ENST00000690538.1

RNA

  1. NR_160272.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AP006507, AP006564, AP006565
    Related
    ENST00000580206.1

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000018.10 Reference GRCh38.p13 Primary Assembly

    Range
    14748172..14855465
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011525665.2XP_011523967.1  ankyrin repeat domain-containing protein 30B isoform X3

    Conserved Domains (4) summary
    cd00204
    Location:67192
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:77169
    Ank_2; Ankyrin repeats (3 copies)
    pfam13637
    Location:4293
    Ank_4; Ankyrin repeats (many copies)
    sd00045
    Location:74103
    ANK; ANK repeat [structural motif]
  2. XM_011525666.2XP_011523968.1  ankyrin repeat domain-containing protein 30B isoform X4

    Conserved Domains (4) summary
    cd00204
    Location:67192
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:77169
    Ank_2; Ankyrin repeats (3 copies)
    pfam13637
    Location:4293
    Ank_4; Ankyrin repeats (many copies)
    sd00045
    Location:74103
    ANK; ANK repeat [structural motif]
  3. XM_024451168.1XP_024306936.1  ankyrin repeat domain-containing protein 30B isoform X6

    Conserved Domains (2) summary
    cd00204
    Location:67192
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    sd00045
    Location:74103
    ANK; ANK repeat [structural motif]
  4. XM_024451167.1XP_024306935.1  ankyrin repeat domain-containing protein 30B isoform X5

    Conserved Domains (2) summary
    cd00204
    Location:67192
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    sd00045
    Location:74103
    ANK; ANK repeat [structural motif]
  5. XM_011525664.2XP_011523966.1  ankyrin repeat domain-containing protein 30B isoform X2

    Conserved Domains (4) summary
    cd00204
    Location:67192
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:77169
    Ank_2; Ankyrin repeats (3 copies)
    pfam13637
    Location:4293
    Ank_4; Ankyrin repeats (many copies)
    sd00045
    Location:74103
    ANK; ANK repeat [structural motif]

RNA

  1. XR_935057.2 RNA Sequence

  2. XR_001753189.1 RNA Sequence

  3. XR_935059.2 RNA Sequence

  4. XR_935061.2 RNA Sequence

  5. XR_001753190.1 RNA Sequence

  6. XR_935060.2 RNA Sequence

  7. XR_935058.2 RNA Sequence

  8. XR_935062.2 RNA Sequence

  9. XR_001753191.1 RNA Sequence

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001145029.1: Suppressed sequence

    Description
    NM_001145029.1: This RefSeq has been removed because currently there is insufficient support for the transcript and protein.
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