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aft adrift [ Drosophila melanogaster (fruit fly) ]

Gene ID: 37034, updated on 18-Sep-2024

Summary

Official Symbol
aftprovided by FlyBase
Official Full Name
adriftprovided by FlyBase
Primary source
FLYBASE:FBgn0026309
Locus tag
Dmel_CG5032
See related
AllianceGenome:FB:FBgn0026309
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG5032; CMTr2; Dmel\CG5032; EG:52C10.7
Summary
Predicted to enable mRNA (nucleoside-2'-O-)-methyltransferase activity. Involved in open tracheal system development. Located in nucleus. Is expressed in several structures, including brain; embryonic/larval tracheal system; epithelium; tracheal pit; and tracheal tip cell. Orthologous to human CMTR2 (cap methyltransferase 2). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

See aft in Genome Data Viewer
Location:
54E9-54E9; 2-84 cM
Exon count:
3
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (17786135..17788556)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (13673640..13676061)

Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene fab1 kinase Neighboring gene mir-31a stem loop Neighboring gene Ubiquitin conjugating enzyme 10 Neighboring gene uncharacterized protein Neighboring gene antisense RNA:CR45270 Neighboring gene Double hit

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables mRNA (nucleoside-2'-O-)-methyltransferase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables mRNA (nucleoside-2'-O-)-methyltransferase activity IMP
Inferred from Mutant Phenotype
more info
PubMed 
enables mRNA (nucleoside-2'-O-)-methyltransferase activity ISS
Inferred from Sequence or Structural Similarity
more info
 
enables methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in 7-methylguanosine mRNA capping IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in 7-methylguanosine mRNA capping IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in methylation IEA
Inferred from Electronic Annotation
more info
 
involved_in open tracheal system development IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in open tracheal system development IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of positive regulation of intracellular mRNA localization IGI
Inferred from Genetic Interaction
more info
PubMed 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in nucleus IDA
Inferred from Direct Assay
more info
PubMed 
located_in nucleus IDA
Inferred from Direct Assay
more info
PubMed 
located_in nucleus TAS
Traceable Author Statement
more info
PubMed 

General protein information

Preferred Names
adrift
Names
CG5032-PA
aft-PA
NP_477413.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033778.4 Reference assembly

    Range
    17786135..17788556
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_058065.3NP_477413.1  adrift [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_477413.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    A1ZB00, O96839, Q961S3, Q9UAS6
    UniProtKB/TrEMBL
    S5G1K6
    Related
    FBpp0088518
    Conserved Domains (1) summary
    pfam01728
    Location:110319
    FtsJ; FtsJ-like methyltransferase