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LMJF_04_0540 hypothetical protein [ Leishmania major strain Friedlin ]

Gene ID: 3684857, updated on 21-Dec-2023

Summary

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Gene symbol
LMJF_04_0540
Gene description
hypothetical protein
Locus tag
LMJF_04_0540
Gene type
protein coding
RNA name
conserved hypothetical protein
RefSeq status
PROVISIONAL
Organism
Leishmania major strain Friedlin (strain: Friedlin)
Lineage
Eukaryota; Euglenozoa; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania
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Genomic context

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Location:
chromosome: 4
Exon count:
1
Sequence:
Chromosome: 4; NC_007245.2 (216926..218692, complement)

Chromosome 4 - NC_007245.2Genomic Context describing neighboring genes Neighboring gene putative huntingtin interacting protein (HIP) Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene putative tyrosine phosphatase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_007245.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the kinetoplastid parasite, Leishmania major. Ivens AC, et al. Science, 2005 Jul 15. PMID 16020728, Free PMC Article
  2. Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania. Rogers MB, et al. Genome Res, 2011 Dec. PMID 22038252, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_007245.2 Reference assembly

    Range
    216926..218692 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_883499.1 → XP_888592.1  conserved hypothetical protein [Leishmania major strain Friedlin]

    See identical proteins and their annotated locations for XP_888592.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    O97201
    Conserved Domains (4) summary
    COG5126
    Location:263 → 407
    FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]
    cd00162
    Location:24 → 71
    RING_Ubox; RING-HC finger (C3HC4-type) [structural motif]
    pfam13499
    Location:269 → 331
    EF-hand_7; EF-hand domain pair
    cl17238
    Location:24 → 71
    RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain
Nucleotide Protein
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