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Tb09.244.2730 60S ribosomal protein L5, putative [ Trypanosoma brucei brucei TREU927 ]

Gene ID: 3661200, updated on 4-Jan-2024

Summary

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Gene symbol
Tb09.244.2730
Gene description
60S ribosomal protein L5, putative
Locus tag
Tb09.244.2730
Gene type
protein coding
RNA name
60S ribosomal protein L5, putative
RefSeq status
PROVISIONAL
Organism
Trypanosoma brucei brucei TREU927 (strain: 927/4 GUTat10.1, sub-species: brucei)
Lineage
Eukaryota; Discoba; Euglenozoa; Kinetoplastea; Metakinetoplastina; Trypanosomatida; Trypanosomatidae; Trypanosoma
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Genomic context

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Location:
chromosome: 9
Exon count:
1
Sequence:
Chromosome: 9; NC_007282.1 (2307524..2308450)

Chromosome 9 - NC_007282.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene 60S ribosomal protein L5, putative Neighboring gene ribosomal protein L15, putative Neighboring gene ribosomal protein L36, putative

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_007282.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Association of a novel preribosomal complex in Trypanosoma brucei determined by fluorescence resonance energy transfer. Wang L, et al. Eukaryot Cell, 2013 Feb. PMID 23264640, Free PMC Article
  2. A novel association between two trypanosome-specific factors and the conserved L5-5S rRNA complex. Ciganda M, et al. PLoS One, 2012. PMID 22859981, Free PMC Article
  3. The genome of the African trypanosome Trypanosoma brucei. Berriman M, et al. Science, 2005 Jul 15. PMID 16020726
  4. Comparative genomics of trypanosomatid parasitic protozoa. El-Sayed NM, et al. Science, 2005 Jul 15. PMID 16020724

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. The N-terminal APK-rich domain and RNA recognition motif of P34 and the L18 domain of L5 are important for the association of the two proteins with each other.
    Title: Association of a novel preribosomal complex in Trypanosoma brucei determined by fluorescence resonance energy transfer.
  2. P34 and P37 complement L5 and bridge the interaction with 5S rRNA, stabilizing it and aiding in the early steps of ribosome biogenesis.
    Title: A novel association between two trypanosome-specific factors and the conserved L5-5S rRNA complex.
Submit: New GeneRIF Correction

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 5S rRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ribosomal large subunit assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cytosolic large ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
60S ribosomal protein L5, putative

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_007282.1 Reference assembly

    Range
    2307524..2308450
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_822569.1 → XP_827662.1  60S ribosomal protein L5, putative [Trypanosoma brucei brucei TREU927]

    See identical proteins and their annotated locations for XP_827662.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A3L6KQY7, C9ZZL2, Q38CY8
    Conserved Domains (1) summary
    PTZ00069
    Location:1 → 308
    PTZ00069; 60S ribosomal protein L5; Provisional
Protein Accession Links
GenPept Link UniProtKB Link
3ZF7_u.1
EAN77331.1
EAN77332.1

Gene LinkOut

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Molecular Biology Databases
Research Materials