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Tb927.8.2250 hypothetical protein [ Trypanosoma brucei brucei TREU927 ]

Gene ID: 3659209, updated on 17-May-2024

Summary

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Gene symbol
Tb927.8.2250
Gene description
hypothetical protein
Locus tag
Tb927.8.2250
See related
TriTrypDB:Tb927.8.2250; VEuPathDB:Tb927.8.2250
Gene type
protein coding
RNA name
hypothetical protein, conserved
RefSeq status
PROVISIONAL
Organism
Trypanosoma brucei brucei TREU927 (strain: 927/4 GUTat10.1, isolate: 927/4 GUTat10.1, sub-species: brucei)
Lineage
Eukaryota; Discoba; Euglenozoa; Kinetoplastea; Metakinetoplastina; Trypanosomatida; Trypanosomatidae; Trypanosoma
Also known as
Tb08.26A17.20
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Genomic context

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Location:
chromosome: 8
Exon count:
1
Sequence:
Chromosome: 8; NC_007281.1 (688146..690689)

Chromosome 8 - NC_007281.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene tryptophanyl-tRNA synthetase, putative Neighboring gene ncRNA Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_007281.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the African trypanosome Trypanosoma brucei. Berriman M, et al. Science, 2005 Jul 15. PMID 16020726
  2. Comparative genomics of trypanosomatid parasitic protozoa. El-Sayed NM, et al. Science, 2005 Jul 15. PMID 16020724

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA ligase (ATP) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables double-stranded DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables polynucleotide 3'-phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tRNA splicing, via endonucleolytic cleavage and ligation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_007281.1 Reference assembly

    Range
    688146..690689
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_841965.1 → XP_847058.1  hypothetical protein, conserved [Trypanosoma brucei brucei TREU927]

    See identical proteins and their annotated locations for XP_847058.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A3L6L4K9, D6XKW2, Q57XG4
    Conserved Domains (3) summary
    smart00382
    Location:505 → 605
    AAA; ATPases associated with a variety of cellular activities
    pfam08302
    Location:788 → 842
    tRNA_lig_CPD; Fungal tRNA ligase phosphodiesterase domain
    cl21455
    Location:511 → 556
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
Protein Accession Links
GenPept Link UniProtKB Link
AAZ12992.1

Gene LinkOut

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Molecular Biology Databases
Research Materials