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rad50 DNA double-strand break repair ATPase Rad50 [ Sulfolobus acidocaldarius DSM 639 ]

Gene ID: 3472966, updated on 31-Mar-2024

Summary

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Gene symbol
rad50
Gene description
DNA double-strand break repair ATPase Rad50
Locus tag
SACI_RS00230
Gene type
protein coding
Organism
Sulfolobus acidocaldarius DSM 639 (strain: DSM 639, type-material: type strain of Sulfolobus acidocaldarius)
Lineage
Archaea; Thermoproteota; Thermoprotei; Sulfolobales; Sulfolobaceae; Sulfolobus
Old locus tag
Saci_0051
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Genomic context

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Sequence:
NC_007181.1 (35772..38432, complement)

NC_007181.1Genomic Context describing neighboring genes Neighboring gene nucleoside hydrolase Neighboring gene Fur family transcriptional regulator Neighboring gene hypothetical protein Neighboring gene DNA double-strand break repair nuclease NurA Neighboring gene DNA double-strand break repair protein Mre11 Neighboring gene DNA double-strand break repair helicase HerA Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_007181.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A protein related to eucaryal and bacterial DNA-motor proteins in the hyperthermophilic archaeon Sulfolobus acidocaldarius. Elie C, et al. J Mol Evol, 1997 Jul. PMID 9211741
  2. The Mre11 protein interacts with both Rad50 and the HerA bipolar helicase and is recruited to DNA following gamma irradiation in the archaeon Sulfolobus acidocaldarius. Quaiser A, et al. BMC Mol Biol, 2008 Feb 22. PMID 18294364, Free PMC Article
  3. NurA, a novel 5'-3' nuclease gene linked to rad50 and mre11 homologs of thermophilic Archaea. Constantinesco F, et al. EMBO Rep, 2002 Jun. PMID 12052775, Free PMC Article
  4. The genome of Sulfolobus acidocaldarius, a model organism of the Crenarchaeota. Chen L, et al. J Bacteriol, 2005 Jul. PMID 15995215, Free PMC Article

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. These results demonstrate the functional interaction between Mre11, Rad50 and the HerA helicase and suggest that each protein play different roles when acting on its own or in association with its partners.
    Title: The Mre11 protein interacts with both Rad50 and the HerA bipolar helicase and is recruited to DNA following gamma irradiation in the archaeon Sulfolobus acidocaldarius.
Submit: New GeneRIF Correction

General protein information

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Preferred Names
DNA double-strand break repair ATPase Rad50

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_007181.1 Reference assembly

    Range
    35772..38432 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_011276982.1 DNA double-strand break repair ATPase Rad50 [Sulfolobus acidocaldarius]

    See identical proteins and their annotated locations for WP_011276982.1

    UniProtKB/Swiss-Prot
    O33600, Q4JCJ8
    UniProtKB/TrEMBL
    A0A0U3H4J7, M1J2A8, M1J924
    Conserved Domains (1) summary
    PRK01156
    Location:1 → 881
    PRK01156; chromosome segregation protein; Provisional
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O33600.1

Gene LinkOut

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