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SMD3 small nuclear ribonucleoprotein Sm D3 [ Kluyveromyces marxianus DMKU3-1042 ]

Gene ID: 34717123, updated on 17-May-2024

Summary

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Gene symbol
SMD3
Gene description
small nuclear ribonucleoprotein Sm D3
Locus tag
KLMA_50523
See related
FungiDB:KLMA_50523; VEuPathDB:KLMA_50523
Gene type
protein coding
RNA name
small nuclear ribonucleoprotein Sm D3
RefSeq status
PROVISIONAL
Organism
Kluyveromyces marxianus DMKU3-1042 (strain: DMKU3-1042)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Kluyveromyces
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Genomic context

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See SMD3 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
1
Sequence:
Chromosome: 5; NC_036029.1 (1124567..1124869, complement)

Chromosome 5 - NC_036029.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene exocyst complex component SEC5 Neighboring gene vacuolar membrane protein PEP3 Neighboring gene transcription initiation factor TFIID subunit 10

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_036029.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic basis of the highly efficient yeast Kluyveromyces marxianus: complete genome sequence and transcriptome analyses. Lertwattanasakul N, et al. Biotechnol Biofuels, 2015. PMID 25834639, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in RNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in spliceosomal snRNP assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SMN-Sm protein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of U1 snRNP IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of U12-type spliceosomal complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of U2 snRNP IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of U4 snRNP IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of U5 snRNP IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of catalytic step 2 spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of commitment complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of pICln-Sm protein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of precatalytic spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of spliceosomal tri-snRNP complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
small nuclear ribonucleoprotein Sm D3

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_036029.1 Reference assembly

    Range
    1124567..1124869 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022820526.1 → XP_022676981.1  small nuclear ribonucleoprotein Sm D3 [Kluyveromyces marxianus DMKU3-1042]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    W0TBZ7
    Conserved Domains (1) summary
    cd01721
    Location:5 → 74
    Sm_D3; Sm protein D3
Nucleotide Protein
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