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SHM2 serine hydroxymethyltransferase [ Kluyveromyces marxianus DMKU3-1042 ]

Gene ID: 34714780, updated on 17-May-2024

Summary

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Gene symbol
SHM2
Gene description
serine hydroxymethyltransferase
Locus tag
KLMA_20305
See related
FungiDB:KLMA_20305; VEuPathDB:KLMA_20305
Gene type
protein coding
RNA name
serine hydroxymethyltransferase
RefSeq status
PROVISIONAL
Organism
Kluyveromyces marxianus DMKU3-1042 (strain: DMKU3-1042)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Kluyveromyces
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Genomic context

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Location:
chromosome: 2
Exon count:
1
Sequence:
Chromosome: 2; NC_036026.1 (655823..657232)

Chromosome 2 - NC_036026.1Genomic Context describing neighboring genes Neighboring gene basic-leucine zipper (bZIP) transcription factor Neighboring gene alanine--glyoxylate aminotransferase 1 Neighboring gene uncharacterized protein Neighboring gene serine/threonine-protein kinase CAK1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_036026.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic basis of the highly efficient yeast Kluyveromyces marxianus: complete genome sequence and transcriptome analyses. Lertwattanasakul N, et al. Biotechnol Biofuels, 2015. PMID 25834639, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cobalt ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glycine hydroxymethyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables serine binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in L-serine catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in folic acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycine biosynthetic process from serine IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tetrahydrofolate interconversion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
serine hydroxymethyltransferase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_036026.1 Reference assembly

    Range
    655823..657232
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022817915.1 → XP_022674635.1  serine hydroxymethyltransferase [Kluyveromyces marxianus DMKU3-1042]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    W0T6S6
    Conserved Domains (1) summary
    PLN03226
    Location:15 → 468
    PLN03226; serine hydroxymethyltransferase; Provisional
Nucleotide Protein
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