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PGU1 polygalacturonase [ Kluyveromyces marxianus DMKU3-1042 ]

Gene ID: 34714174, updated on 17-May-2024

Summary

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Gene symbol
PGU1
Gene description
polygalacturonase
Locus tag
KLMA_10516
See related
FungiDB:KLMA_10516; VEuPathDB:KLMA_10516
Gene type
protein coding
RNA name
polygalacturonase
RefSeq status
PROVISIONAL
Organism
Kluyveromyces marxianus DMKU3-1042 (strain: DMKU3-1042)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Kluyveromyces
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Genomic context

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See PGU1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
2
Sequence:
Chromosome: 1; NC_036025.1 (1089524..1091050, complement)

Chromosome 1 - NC_036025.1Genomic Context describing neighboring genes Neighboring gene branched-chain-amino-acid aminotransferase Neighboring gene GAL4 domain-containing family protein Neighboring gene uncharacterized protein conserved in bacteria Neighboring gene inulinase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_036025.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic basis of the highly efficient yeast Kluyveromyces marxianus: complete genome sequence and transcriptome analyses. Lertwattanasakul N, et al. Biotechnol Biofuels, 2015. PMID 25834639, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in pectin catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
polygalacturonase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_036025.1 Reference assembly

    Range
    1089524..1091050 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022822140.1 → XP_022674029.1  polygalacturonase [Kluyveromyces marxianus DMKU3-1042]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q6TA03, W0T504
    Conserved Domains (1) summary
    pfam00295
    Location:74 → 394
    Glyco_hydro_28; Glycosyl hydrolases family 28
Nucleotide Protein
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