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POTEA POTE ankyrin domain family member A [ Homo sapiens (human) ]

Gene ID: 340441, updated on 11-Jun-2021

Summary

Official Symbol
POTEAprovided by HGNC
Official Full Name
POTE ankyrin domain family member Aprovided by HGNC
Primary source
HGNC:HGNC:33893
See related
Ensembl:ENSG00000188877 MIM:608915
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
A26A1; POTE8; POTE-8; CT104.3
Expression
Low expression observed in reference dataset See more
Orthologs
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Genomic context

See POTEA in Genome Data Viewer
Location:
8p11.1
Exon count:
14
Annotation release Status Assembly Chr Location
109.20210514 current GRCh38.p13 (GCF_000001405.39) 8 NC_000008.11 (43292370..43365175)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (43147585..43218328)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene AFG3L2 pseudogene 1 Neighboring gene protein SPHAR-like Neighboring gene RNA, U6 small nuclear 104, pseudogene Neighboring gene Rho GTPase activating protein 20 pseudogene Neighboring gene uncharacterized LOC105379397

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General protein information

Preferred Names
POTE ankyrin domain family member A
Names
ANKRD26-like family A, member 1
cancer/testis antigen family 104, member 3
prostate, ovary, testis-expressed protein on chromosome 8
protein expressed in prostate, ovary, testis, and placenta 8

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001002920.1NP_001002920.1  POTE ankyrin domain family member A isoform 1

    See identical proteins and their annotated locations for NP_001002920.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the shorter transcript and encodes the shorter isoform (1). It should be noted that this variant may possibly undergo nonsense-mediated mRNA decay (NMD); this RefSeq is currently being retained because this gene is considered to be protein-coding in the literature, including PMID:15276201.
    Source sequence(s)
    AY462870
    UniProtKB/Swiss-Prot
    Q6S8J7
    Conserved Domains (4) summary
    cd00204
    Location:93218
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:103195
    Ank_2; Ankyrin repeats (3 copies)
    pfam13637
    Location:69119
    Ank_4; Ankyrin repeats (many copies)
    sd00045
    Location:133162
    ANK; ANK repeat [structural motif]
  2. NM_001005365.2NP_001005365.2  POTE ankyrin domain family member A isoform 2

    See identical proteins and their annotated locations for NP_001005365.2

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) includes an additional in-frame exon in the central coding region, compared to variant 1, resulting in an isoform (2) that is longer than isoform 1. It should be noted that this variant may possibly undergo nonsense-mediated mRNA decay (NMD); this RefSeq is currently being retained because this gene is considered to be protein-coding in the literature, including PMID:15276201.
    Source sequence(s)
    AY462869
    UniProtKB/Swiss-Prot
    Q6S8J7
    Conserved Domains (4) summary
    cd00204
    Location:93218
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:103195
    Ank_2; Ankyrin repeats (3 copies)
    pfam13637
    Location:69119
    Ank_4; Ankyrin repeats (many copies)
    sd00045
    Location:164195
    ANK; ANK repeat [structural motif]

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20210514

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p13 Primary Assembly

    Range
    43292370..43365175
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024447146.1XP_024302914.1  POTE ankyrin domain family member A isoform X2

    Related
    ENSP00000492193.1, ENST00000519951.2
    Conserved Domains (4) summary
    cd00204
    Location:93218
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    sd00045
    Location:164195
    ANK; ANK repeat [structural motif]
    pfam14915
    Location:452559
    CCDC144C; CCDC144C protein coiled-coil region
    cl25732
    Location:302538
    SMC_N; RecF/RecN/SMC N terminal domain
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