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CG12702 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 32993, updated on 18-Sep-2024

Summary

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Official Symbol
CG12702provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0031070
Locus tag
Dmel_CG12702
See related
AllianceGenome:FB:FBgn0031070
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG12702; lincRNA.1023
Summary
Is expressed in several structures, including embryonic central brain; extended germ band embryo; and lateral cord surface glial cell. Orthologous to human CIP2A (cellular inhibitor of PP2A). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

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Location:
18F1-18F1; 1-64 cM
Exon count:
7
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (19759173..19764874, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (19653206..19658907, complement)

Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene antisense RNA:CR45501 Neighboring gene parvin Neighboring gene Augmenter of liver regeneration Neighboring gene ATP binding cassette subfamily D member 3 Neighboring gene zelda Neighboring gene long non-coding RNA:CR44885

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Hedgehog targets in the Drosophila embryo and the mechanisms that generate tissue-specific outputs of Hedgehog signaling. Biehs B, et al. Development, 2010 Nov. PMID 20978080, Free PMC Article
  2. Quantifying adaptive evolution in the Drosophila immune system. Obbard DJ, et al. PLoS Genet, 2009 Oct. PMID 19851448, Free PMC Article
  3. Toward a comprehensive map of the effectors of rab GTPases. Gillingham AK, et al. Dev Cell, 2014 Nov 10. PMID 25453831, Free PMC Article
  4. Analysis of Ras-induced overproliferation in Drosophila hemocytes. Asha H, et al. Genetics, 2003 Jan. PMID 12586708, Free PMC Article
  5. A Luciferase-fragment Complementation Assay to Detect Lipid Droplet-associated Protein-Protein Interactions. Kolkhof P, et al. Mol Cell Proteomics, 2017 Mar. PMID 27956707, Free PMC Article

See all (25) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

General protein information

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Preferred Names
uncharacterized protein
Names
CG12702-PA
CG12702-PB
CG12702-PC

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004354.4 Reference assembly

    Range
    19759173..19764874 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001298536.1 → NP_001285465.1  uncharacterized protein Dmel_CG12702, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001285465.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q4QQC1, Q9VWC7
    Conserved Domains (4) summary
    pfam12329
    Location:738 → 793
    TMF_DNA_bd; TATA element modulatory factor 1 DNA binding
    pfam13300
    Location:834 → 870
    DUF4078; Domain of unknown function (DUF4078)
    pfam15898
    Location:787 → 855
    PRKG1_interact; cGMP-dependent protein kinase interacting domain
    pfam17078
    Location:633 → 827
    SHE3; SWI5-dependent HO expression protein 3

  2. NM_001272806.1 → NP_001259735.1  uncharacterized protein Dmel_CG12702, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001259735.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q4QQC1, Q9VWC7
    Conserved Domains (4) summary
    pfam12329
    Location:738 → 793
    TMF_DNA_bd; TATA element modulatory factor 1 DNA binding
    pfam13300
    Location:834 → 870
    DUF4078; Domain of unknown function (DUF4078)
    pfam15898
    Location:787 → 855
    PRKG1_interact; cGMP-dependent protein kinase interacting domain
    pfam17078
    Location:633 → 827
    SHE3; SWI5-dependent HO expression protein 3

  3. NM_134511.2 → NP_608355.1  uncharacterized protein Dmel_CG12702, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_608355.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q4QQC1, Q9VWC7
    Related
    FBpp0074578
    Conserved Domains (4) summary
    pfam12329
    Location:738 → 793
    TMF_DNA_bd; TATA element modulatory factor 1 DNA binding
    pfam13300
    Location:834 → 870
    DUF4078; Domain of unknown function (DUF4078)
    pfam15898
    Location:787 → 855
    PRKG1_interact; cGMP-dependent protein kinase interacting domain
    pfam17078
    Location:633 → 827
    SHE3; SWI5-dependent HO expression protein 3
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9VWC7 Q9VWC7

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