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CNB00870 hypothetical protein [ Cryptococcus neoformans var. neoformans JEC21 ]

Gene ID: 3256046, updated on 17-May-2024

Summary

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Gene symbol
CNB00870
Gene description
hypothetical protein
Locus tag
CNB00870
See related
FungiDB:CNB00870; VEuPathDB:CNB00870
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Cryptococcus neoformans var. neoformans JEC21 (strain: JEC21, serotype: D)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex
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Genomic context

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See CNB00870 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
5
Sequence:
Chromosome: 2; NC_006684.1 (250172..252458)

Chromosome 2 - NC_006684.1Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene expressed protein Neighboring gene longevity-assurance protein, putative Neighboring gene hypothetical protein Neighboring gene ER to Golgi transport-related protein, putative Neighboring gene cysteine-tRNA ligase, putative Neighboring gene expressed protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_006684.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the basidiomycetous yeast and human pathogen Cryptococcus neoformans. Loftus BJ, et al. Science, 2005 Feb 25. PMID 15653466, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables U1 snRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of U1 snRNP IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_006684.1 Reference assembly

    Range
    250172..252458
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024656447.1 → XP_024512241.1  hypothetical protein CNB00870 [Cryptococcus neoformans var. neoformans JEC21]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A854QJ64, Q55X78, Q5KMQ5
    Conserved Domains (2) summary
    cd12246
    Location:28 → 105
    RRM1_U1A_like; RNA recognition motif 1 in the U1A/U2B"/SNF protein family
    cl17169
    Location:194 → 277
    RRM_SF; RNA recognition motif (RRM) superfamily
Nucleotide Protein
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