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CNJ03200 tyrosine-tRNA ligase, putative [ Cryptococcus neoformans var. neoformans JEC21 ]

Gene ID: 3254328, updated on 17-May-2024

Summary

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Gene symbol
CNJ03200
Gene description
tyrosine-tRNA ligase, putative
Locus tag
CNJ03200
See related
FungiDB:CNJ03200; VEuPathDB:CNJ03200
Gene type
protein coding
RNA name
tyrosine-tRNA ligase, putative
RefSeq status
PROVISIONAL
Organism
Cryptococcus neoformans var. neoformans JEC21 (strain: JEC21, serotype: D)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex
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Genomic context

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Location:
chromosome: 10
Exon count:
5
Sequence:
Chromosome: 10; NC_006679.1 (1003303..1005059, complement)

Chromosome 10 - NC_006679.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene expressed protein Neighboring gene nucleus protein, putative Neighboring gene hypothetical protein Neighboring gene MFS transporter, putative Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_006679.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the basidiomycetous yeast and human pathogen Cryptococcus neoformans. Loftus BJ, et al. Science, 2005 Feb 25. PMID 15653466, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tyrosine-tRNA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tyrosyl-tRNA aminoacylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tyrosine-tRNA ligase, putative

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_006679.1 Reference assembly

    Range
    1003303..1005059 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_567400.2 → XP_567400.1  tyrosine-tRNA ligase, putative [Cryptococcus neoformans var. neoformans JEC21]

    See identical proteins and their annotated locations for XP_567400.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A225XZ79, Q55LF9, Q5KA36
    Conserved Domains (2) summary
    cd00805
    Location:56 → 360
    TyrRS_core; catalytic core domain of tyrosinyl-tRNA synthetase
    PRK05912
    Location:24 → 471
    PRK05912; tyrosyl-tRNA synthetase; Validated
Nucleotide Protein
Heading Accession and Version

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