U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CNA07770 hypothetical protein [ Cryptococcus neoformans var. neoformans JEC21 ]

Gene ID: 3253596, updated on 31-Jan-2024

Summary

Go to the top of the page Help
Gene symbol
CNA07770
Gene description
hypothetical protein
Locus tag
CNA07770
Gene type
protein coding
RNA name
conserved hypothetical protein
RefSeq status
PROVISIONAL
Organism
Cryptococcus neoformans var. neoformans JEC21 (strain: JEC21, serotype: D)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 1
Exon count:
5
Sequence:
Chromosome: 1; NC_006670.1 (2143834..2147495)

Chromosome 1 - NC_006670.1Genomic Context describing neighboring genes Neighboring gene acetate--CoA ligase, putative Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene nicotinamidase, putative Neighboring gene hypothetical protein Neighboring gene calcineurin-binding protein - related Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_006670.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. The genome of the basidiomycetous yeast and human pathogen Cryptococcus neoformans. Loftus BJ, et al. Science, 2005 Feb 25. PMID 15653466, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-glucosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glucan catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_006670.1 Reference assembly

    Range
    2143834..2147495
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_567124.2 → XP_567124.1  conserved hypothetical protein [Cryptococcus neoformans var. neoformans JEC21]

    See identical proteins and their annotated locations for XP_567124.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q55YS6, Q5KN45
    Conserved Domains (4) summary
    cd00161
    Location:38 → 151
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    pfam00652
    Location:35 → 149
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
    cl00427
    Location:350 → 396
    TM_PBP2; Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and ...
    cl23725
    Location:520 → 747
    Glyco_hydro_1; Glycosyl hydrolase family 1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases