U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

6030443J06Rik RIKEN cDNA 6030443J06 gene [ Mus musculus (house mouse) ]

Gene ID: 320719, updated on 8-Feb-2024

Summary

Official Symbol
6030443J06Rikprovided by MGI
Official Full Name
RIKEN cDNA 6030443J06 geneprovided by MGI
Primary source
MGI:MGI:2444595
See related
Ensembl:ENSMUSG00000097207 AllianceGenome:MGI:2444595
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
1700030G06Rik
Expression
Broad expression in testis adult (RPKM 1.5), limb E14.5 (RPKM 0.3) and 16 other tissues See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See 6030443J06Rik in Genome Data Viewer
Location:
5 A3; 5 10.07 cM
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (22755411..22763169)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (22550413..22558171)

Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene origin recognition complex, subunit 5 Neighboring gene ribosomal protein L22 like 1 pseudogene Neighboring gene STARR-seq mESC enhancer starr_12587 Neighboring gene STARR-seq mESC enhancer starr_12588 Neighboring gene predicted gene, 22887 Neighboring gene STARR-seq mESC enhancer starr_12589 Neighboring gene predicted gene, 42225 Neighboring gene STARR-seq mESC enhancer starr_12591 Neighboring gene ubiquitin-conjugating enzyme E2 L3 pseudogene Neighboring gene ribosomal protein L17, pseudogene 5

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_102315.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AK029857, AV271716, BE864128, CF743844
    Related
    ENSMUST00000181764.8

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000071.7 Reference GRCm39 C57BL/6J

    Range
    22755411..22763169
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)