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Grep1 glycine rich extracellular protein 1 [ Mus musculus (house mouse) ]

Gene ID: 320309, updated on 5-Mar-2024

Summary

Official Symbol
Grep1provided by MGI
Official Full Name
glycine rich extracellular protein 1provided by MGI
Primary source
MGI:MGI:2443785
See related
Ensembl:ENSMUSG00000043747 AllianceGenome:MGI:2443785
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
1520401A03Rik
Expression
Biased expression in testis adult (RPKM 2.1), limb E14.5 (RPKM 1.0) and 4 other tissues See more
Orthologs
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Genomic context

See Grep1 in Genome Data Viewer
Location:
17 A3.3; 17 12.01 cM
Exon count:
43
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 17 NC_000083.7 (23923582..23945299, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 17 NC_000083.6 (23704608..23726451, complement)

Chromosome 17 - NC_000083.7Genomic Context describing neighboring genes Neighboring gene claudin 6 Neighboring gene claudin 9 Neighboring gene protein kinase, membrane associated tyrosine/threonine 1 Neighboring gene progestin and adipoQ receptor family member IV Neighboring gene kringle containing transmembrane protein 2

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
glycine rich extracellular protein 1; glycine-rich extracellular protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000083.7 Reference GRCm39 C57BL/6J

    Range
    23923582..23945299 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017317755.3XP_017173244.1  glycine-rich extracellular protein 1 isoform X8

    UniProtKB/TrEMBL
    A0A0J9YVH6
    Conserved Domains (1) summary
    pfam09606
    Location:11333
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
  2. XM_017317753.3XP_017173242.1  glycine-rich extracellular protein 1 isoform X8

    UniProtKB/TrEMBL
    A0A0J9YVH6
    Conserved Domains (1) summary
    pfam09606
    Location:11333
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
  3. XM_017317750.2XP_017173239.1  glycine-rich extracellular protein 1 isoform X5

    UniProtKB/TrEMBL
    A0A0J9YVH6
    Conserved Domains (1) summary
    pfam09606
    Location:80381
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
  4. XM_017317748.2XP_017173237.1  glycine-rich extracellular protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A0J9YVH6
    Conserved Domains (1) summary
    pfam09606
    Location:126391
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
  5. XM_017317756.2XP_017173245.1  glycine-rich extracellular protein 1 isoform X9

    Conserved Domains (1) summary
    pfam09606
    Location:92326
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
  6. XM_017317749.2XP_017173238.1  glycine-rich extracellular protein 1 isoform X4

    UniProtKB/TrEMBL
    A0A0J9YVH6
    Conserved Domains (1) summary
    pfam09606
    Location:80402
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
  7. XM_017317746.2XP_017173235.1  glycine-rich extracellular protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A0J9YVH6
    Conserved Domains (1) summary
    pfam09606
    Location:80402
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
  8. XM_017317752.2XP_017173241.1  glycine-rich extracellular protein 1 isoform X7

    UniProtKB/TrEMBL
    A0A0J9YVH6
  9. XM_017317751.2XP_017173240.1  glycine-rich extracellular protein 1 isoform X6

    UniProtKB/TrEMBL
    A0A0J9YVH6
    Conserved Domains (1) summary
    pfam09606
    Location:80369
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
  10. XM_017317747.2XP_017173236.1  glycine-rich extracellular protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A0J9YVH6
  11. XM_017317758.2XP_017173247.1  glycine-rich extracellular protein 1 isoform X11

    UniProtKB/TrEMBL
    A0A0J9YVH6
    Conserved Domains (1) summary
    pfam09606
    Location:49436
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
  12. XM_017317757.2XP_017173246.1  glycine-rich extracellular protein 1 isoform X10

    UniProtKB/TrEMBL
    A0A0J9YVH6
    Related
    ENSMUSP00000144664.2, ENSMUST00000201734.4
    Conserved Domains (1) summary
    pfam09606
    Location:49448
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal

RNA

  1. XR_001782162.2 RNA Sequence

  2. XR_876666.3 RNA Sequence

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_177132.3: Suppressed sequence

    Description
    NM_177132.3: This RefSeq was permanently suppressed because it is a nonsense-mediated mRNA decay (NMD) candidate.