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rpoZ DNA-directed RNA polymerase subunit omega [ Thermus thermophilus HB8 ]

Gene ID: 3169896, updated on 12-Feb-2024

Summary

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Gene symbol
rpoZ
Gene description
DNA-directed RNA polymerase subunit omega
Locus tag
TTH_RS07905
Gene type
protein coding
Organism
Thermus thermophilus HB8 (strain: HB8, type-material: type strain of Thermus thermophilus)
Lineage
Bacteria; Deinococcota; Deinococci; Thermales; Thermaceae; Thermus
Old locus tag
TTHA1561
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Genomic context

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Location:
chromosome: 1
Sequence:
Chromosome: 1; NC_006461.1 (1485216..1485515, complement)

Chromosome 1 - NC_006461.1Genomic Context describing neighboring genes Neighboring gene arginine repressor Neighboring gene bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC Neighboring gene guanylate kinase Neighboring gene glycoside hydrolase family 13 protein Neighboring gene DNA base-flipping protein Neighboring gene SpoIID/LytB domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_006461.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The ratcheted and ratchetable structural states of RNA polymerase underlie multiple transcriptional functions. Sekine S, et al. Mol Cell, 2015 Feb 5. PMID 25601758
  2. Escherichia coli RNA polymerase subunit omega and its N-terminal domain bind full-length beta' to facilitate incorporation into the alpha2beta subassembly. Ghosh P, et al. Eur J Biochem, 2001 Sep. PMID 11531998
  3. The omega subunit of Escherichia coli K-12 RNA polymerase is not required for stringent RNA control in vivo. Gentry D, et al. J Bacteriol, 1991 Jun. PMID 1711031, Free PMC Article

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
DNA-directed RNA polymerase subunit omega
WP_008633185.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_006461.1 Reference assembly

    Range
    1485216..1485515 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_008633185.1 MULTISPECIES: DNA-directed RNA polymerase subunit omega [Thermus]

    See identical proteins and their annotated locations for WP_008633185.1

    UniProtKB/Swiss-Prot
    Q5SI19, Q72ID6, Q8RQE7
    UniProtKB/TrEMBL
    A0A1J1EUF1, F6DDX4, H7GHJ9, H9ZPY0
    Conserved Domains (1) summary
    PRK00392
    Location:1 → 84
    rpoZ; DNA-directed RNA polymerase subunit omega; Reviewed
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
2O5I_E.1
2O5I_O.1
2O5J_E.1
2O5J_O.1
2PPB_E.1
2PPB_O.1
3AOH_E.1
3AOH_J.1
3AOH_O.1
3AOI_E.1
3AOI_J.1
3AOI_O.1
4G7H_E.1
4G7H_O.1
4G7O_E.1
4G7O_O.1
4G7Z_E.1
4G7Z_O.1
4GZY_E.1
4GZZ_E.1
4MQ9_E.1
4OIN_E.1
4OIO_E.1
4OIP_E.1
4OIQ_E.1
4OIR_E.1
4Q4Z_E.1
4Q5S_E.1
4WQS_E.1
4WQS_O.1
4WQT_E.1
4WQT_J.1
4WQT_O.1
5D4C_E.1
5D4C_O.1
5D4D_E.1
5D4D_O.1
5D4E_E.1
5D4E_O.1
5E17_E.1
5E18_E.1
5I2D_E.1
5I2D_P.1
5VO8_E.1
5VOI_E.1
5XJ0_E.1
6ASG_E.1
6KQD_E.1
6KQD_O.1
6KQE_E.1
6KQF_E.1
6KQG_E.1
6KQH_E.1
6KQL_E.1
6KQM_E.1
6KQN_E.1
6L74_E.1
6LTS_E.1
6M6A_E.1
6M6B_E.1
6M6C_E.1
6OVR_E.1
7EH0_E.1
7EH1_E.1
7EH2_E.1
7EH2_O.1
Q8RQE7.2

Gene LinkOut

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Research Materials