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sc scute [ Drosophila melanogaster (fruit fly) ]

Gene ID: 30982, updated on 26-Aug-2021

Summary

Official Symbol
scprovided by FlyBase
Official Full Name
scuteprovided by FlyBase
Primary source
FLYBASE:FBgn0004170
Locus tag
Dmel_CG3827
Gene type
protein coding
RNA name
scute
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
AS-C T4; AS-C T4sc; ascT4; bHLHc28; CG3827; Dmel\CG3827; DROACS2; EG:198A6.1; Hw; l(1)1Ba; Sc; sc/T4; scalpha; scute/sisterlessB; SC_DA; sis b; sis-b; sisb; sisB; T4; T4 AS-C
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Genomic context

Location:
1A8-1A8; 1-0 cM
Exon count:
1
Annotation release Status Assembly Chr Location
Release 6.32 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (396060..397497)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (290093..291530)

Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR44752 Neighboring gene long non-coding RNA:CR44753 Neighboring gene lethal of scute Neighboring gene Pepsinogen C-like

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by FlyBase

Process Evidence Code Pubs
involved_in Malpighian tubule tip cell differentiation IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in central nervous system development TAS
Traceable Author Statement
more info
PubMed 
involved_in chaeta development IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in chaeta morphogenesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in chaeta morphogenesis NAS
Non-traceable Author Statement
more info
PubMed 
involved_in enteroendocrine cell differentiation IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in negative regulation of apoptotic process IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in nervous system development TAS
Traceable Author Statement
more info
PubMed 
involved_in neuroblast fate determination IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in neuron differentiation IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in peripheral nervous system development IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in peripheral nervous system development TAS
Traceable Author Statement
more info
PubMed 
involved_in positive regulation of transcription by RNA polymerase II IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in positive regulation of transcription by RNA polymerase II IDA
Inferred from Direct Assay
more info
PubMed 
involved_in positive regulation of transcription by RNA polymerase II IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in regulation of mitotic cell cycle TAS
Traceable Author Statement
more info
PubMed 
involved_in regulation of neurogenesis IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in regulation of transcription by RNA polymerase II IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in regulation of transcription, DNA-templated ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
involved_in regulation of transcription, DNA-templated NAS
Non-traceable Author Statement
more info
PubMed 
involved_in sensory organ development IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in sensory organ development IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in sex determination IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in sex determination IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in sex determination TAS
Traceable Author Statement
more info
PubMed 
involved_in sex determination, establishment of X:A ratio NAS
Non-traceable Author Statement
more info
PubMed 
involved_in ventral cord development NAS
Non-traceable Author Statement
more info
PubMed 
Component Evidence Code Pubs
part_of RNA polymerase II transcription regulator complex IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
part_of transcription regulator complex IPI
Inferred from Physical Interaction
more info
PubMed 

General protein information

Preferred Names
scute
Names
Achaete/Scute
CG3827-PA
Hairy-wing
achaete-scute
asc
sc-PA
scute alpha
scute-T4-transcript
scute/sisterless-b
sisterless-b

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004354.4 Reference assembly

    Range
    396060..397497
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_057455.3NP_476803.1  scute [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_476803.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P10084
    Related
    FBpp0070072, FBtr0070073
    Conserved Domains (1) summary
    pfam00010
    Location:105163
    HLH; Helix-loop-helix DNA-binding domain
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