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Znhit2 zinc finger, HIT domain containing 2 [ Mus musculus (house mouse) ]

Gene ID: 29805, updated on 5-Mar-2024

Summary

Official Symbol
Znhit2provided by MGI
Official Full Name
zinc finger, HIT domain containing 2provided by MGI
Primary source
MGI:MGI:1352481
See related
Ensembl:ENSMUSG00000075227 AllianceGenome:MGI:1352481
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Fon; ORF6; C11orf5; Znhit2-ps
Summary
Predicted to enable metal ion binding activity. Is expressed in several structures, including liver; renal cortex; seminiferous tubule; telencephalon; and thymus. Orthologous to human ZNHIT2 (zinc finger HIT-type containing 2). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

See Znhit2 in Genome Data Viewer
Location:
19 A; 19 4.34 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 19 NC_000085.7 (6111237..6112498)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 19 NC_000085.6 (6061207..6062468)

Chromosome 19 - NC_000085.7Genomic Context describing neighboring genes Neighboring gene synovial apoptosis inhibitor 1, synoviolin Neighboring gene mitochondrial ribosomal protein L49 Neighboring gene STARR-seq mESC enhancer starr_45418 Neighboring gene FAU ubiquitin like and ribosomal protein S30 fusion Neighboring gene transmembrane 7 superfamily member 2 Neighboring gene VPS51 GARP complex subunit Neighboring gene CapStarr-seq enhancer MGSCv37_chr19:6077181-6077364 Neighboring gene transmembrane protein 262 Neighboring gene zinc finger like protein 1

Genomic regions, transcripts, and products

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (1) 

General protein information

Preferred Names
zinc finger HIT domain-containing protein 2
Names
zinc finger, HIT domain containing 2, pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_013859.2NP_038887.2  zinc finger HIT domain-containing protein 2

    See identical proteins and their annotated locations for NP_038887.2

    Status: VALIDATED

    Source sequence(s)
    AK086863
    Consensus CDS
    CCDS57131.1
    UniProtKB/Swiss-Prot
    Q8C356, Q8VCQ7, Q9QY66
    UniProtKB/TrEMBL
    Q569Y3
    Related
    ENSMUSP00000134031.3, ENSMUST00000162726.5
    Conserved Domains (1) summary
    pfam04438
    Location:336
    zf-HIT; HIT zinc finger

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000085.7 Reference GRCm39 C57BL/6J

    Range
    6111237..6112498
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)