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DEHA2F09900g DEHA2F09900p [ Debaryomyces hansenii CBS767 ]

Gene ID: 2904206, updated on 17-May-2024

Summary

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Gene symbol
DEHA2F09900g
Gene description
DEHA2F09900p
Locus tag
DEHA2F09900g
See related
FungiDB:DEHA2F09900g; VEuPathDB:DEHA2F09900g
Gene type
protein coding
RNA name
DEHA2F09900p
RefSeq status
PROVISIONAL
Organism
Debaryomyces hansenii CBS767 (strain: CBS767, type-material: culture from type material of Debaryomyces hansenii)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Debaryomyces
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Genomic context

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Location:
chromosome: F
Exon count:
4
Sequence:
Chromosome: F; NC_006048.2 (851273..855926, complement)

Chromosome F - NC_006048.2Genomic Context describing neighboring genes Neighboring gene DEHA2F09856p Neighboring gene DEHA2F09878p Neighboring gene DEHA2F09922p Neighboring gene DEHA2F09944p

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_006048.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome evolution in yeasts. Dujon B, et al. Nature, 2004 Jul 1. PMID 15229592

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Sin3-type complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of chromatin IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DEHA2F09900p
XP_460794.2
  • similar to uniprot|P22579 Saccharomyces cerevisiae YOL004W SIN3 DNA binding protein involved in transcriptional regulation

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_006048.2 Reference assembly

    Range
    851273..855926 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_460794.2 → XP_460794.2  DEHA2F09900p [Debaryomyces hansenii CBS767]

    See identical proteins and their annotated locations for XP_460794.2

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q6BLX7
    Conserved Domains (6) summary
    COG5602
    Location:99 → 1307
    Sin3; Histone deacetylase complex, regulatory component SIN3 [Chromatin structure and dynamics]
    pfam02671
    Location:164 → 208
    PAH; Paired amphipathic helix repeat
    pfam08295
    Location:602 → 697
    Sin3_corepress; Sin3 family co-repressor
    pfam15240
    Location:5 → 131
    Pro-rich; Proline-rich
    pfam16879
    Location:996 → 1260
    Sin3a_C; C-terminal domain of Sin3a protein
    cl19898
    Location:898 → 966
    Noc2; Noc2p family
Nucleotide Protein
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