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DEHA2F08338g DEHA2F08338p [ Debaryomyces hansenii CBS767 ]

Gene ID: 2903340, updated on 17-May-2024

Summary

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Gene symbol
DEHA2F08338g
Gene description
DEHA2F08338p
Locus tag
DEHA2F08338g
See related
FungiDB:DEHA2F08338g; VEuPathDB:DEHA2F08338g
Gene type
protein coding
RNA name
DEHA2F08338p
RefSeq status
PROVISIONAL
Organism
Debaryomyces hansenii CBS767 (strain: CBS767, type-material: culture from type material of Debaryomyces hansenii)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Debaryomyces
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Genomic context

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Location:
chromosome: F
Exon count:
1
Sequence:
Chromosome: F; NC_006048.2 (719650..721560)

Chromosome F - NC_006048.2Genomic Context describing neighboring genes Neighboring gene DEHA2F08294p Neighboring gene DEHA2F08316p Neighboring gene DEHA2F08360p Neighboring gene DEHA2F08382p

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_006048.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome evolution in yeasts. Dujon B, et al. Nature, 2004 Jul 1. PMID 15229592

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in meiotic recombination checkpoint signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in reciprocal meiotic recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in chromosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DEHA2F08338p
XP_460723.2
  • some similarities with uniprot|P38126 Saccharomyces cerevisiae YBR186W PCH2 Nucleolar component of the pachytene checkpoint which prevents chromosome segregation when recombination and chromosome synapsis are defective

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_006048.2 Reference assembly

    Range
    719650..721560
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_460723.2 → XP_460723.2  DEHA2F08338p [Debaryomyces hansenii CBS767]

    See identical proteins and their annotated locations for XP_460723.2

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q6BM48
    Conserved Domains (2) summary
    COG0464
    Location:365 → 574
    SpoVK; AAA+-type ATPase, SpoVK/Ycf46/Vps4 family [Cell wall/membrane/envelope biogenesis, Cell cycle control, cell division, chromosome partitioning, Signal transduction mechanisms]
    pfam00004
    Location:403 → 557
    AAA; ATPase family associated with various cellular activities (AAA)
Nucleotide Protein
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