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LINC02209 long intergenic non-protein coding RNA 2209 [ Homo sapiens (human) ]

Gene ID: 286135, updated on 13-May-2022

Summary

Official Symbol
LINC02209provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 2209provided by HGNC
Primary source
HGNC:HGNC:27827
See related
Ensembl:ENSG00000253279 AllianceGenome:HGNC:27827
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
FAM183CP
Expression
Low expression observed in reference dataset See more
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Genomic context

See LINC02209 in Genome Data Viewer
Location:
8p12
Exon count:
3
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (29921513..29953609)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (30200359..30232450)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (29779029..29811125)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene Sharpr-MPRA regulatory region 8795 Neighboring gene uncharacterized LOC105379354 Neighboring gene microRNA 3148 Neighboring gene Sharpr-MPRA regulatory region 3682

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Other Names

  • family with sequence similarity 183 member C, pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_024473.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL833525, BC126344
    Related
    ENST00000521245.2

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

    Range
    29921513..29953609
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060932.1 Alternate T2T-CHM13v2.0

    Range
    30200359..30232450
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)