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TPI1P2 triosephosphate isomerase 1 pseudogene 2 [ Homo sapiens (human) ]

Gene ID: 286016, updated on 16-Jan-2024

Summary

Official Symbol
TPI1P2provided by HGNC
Official Full Name
triosephosphate isomerase 1 pseudogene 2provided by HGNC
Primary source
HGNC:HGNC:38069
See related
Ensembl:ENSG00000293205 AllianceGenome:HGNC:38069
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

See TPI1P2 in Genome Data Viewer
Location:
7q32.1
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (129055223..129057239)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (130368093..130370109)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (128695277..128697293)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene transportin 3 Neighboring gene RNA, 7SL, cytoplasmic 306, pseudogene Neighboring gene NANOG hESC enhancer GRCh37_chr7:128622104-128622662 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_97543 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:128669474-128669974 Neighboring gene ornithine decarboxylase pseudogene Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26616 Neighboring gene Sharpr-MPRA regulatory region 4017 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_97561 Neighboring gene small nucleolar RNA U13 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26617 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26618 Neighboring gene zinc finger protein 195-like Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26619 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26620

Genomic regions, transcripts, and products

Phenotypes

EBI GWAS Catalog

Description
A systemic sclerosis and systemic lupus erythematosus pan-meta-GWAS reveals new shared susceptibility loci.
EBI GWAS Catalog

Interactions

Products Interactant Other Gene Complex Source Pubs Description

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_002187.3 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC018639
    Related
    ENST00000635637.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

    Range
    129055223..129057239
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060931.1 Alternate T2T-CHM13v2.0

    Range
    130368093..130370109
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_203419.1: Suppressed sequence

    Description
    NM_203419.1: This RefSeq record was removed by NCBI staff. Contact info@ncbi.nlm.nih.gov for further information.