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LINC02860 long intergenic non-protein coding RNA 2860 [ Homo sapiens (human) ]

Gene ID: 285941, updated on 13-May-2022

Summary

Official Symbol
LINC02860provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 2860provided by HGNC
Primary source
HGNC:HGNC:22364
See related
Ensembl:ENSG00000222004 AllianceGenome:HGNC:22364
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
C7orf71
Expression
Low expression observed in reference dataset See more
Orthologs
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Genomic context

See LINC02860 in Genome Data Viewer
Location:
7p15.2
Exon count:
4
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (26637871..26647272)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (26773589..26782993)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (26677490..26686891)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124901605 Neighboring gene uncharacterized LOC100506289 Neighboring gene uncharacterized LOC101928077 Neighboring gene src kinase associated phosphoprotein 2 Neighboring gene VISTA enhancer hs296 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr7:26823633-26824297

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Phenotypes

EBI GWAS Catalog

Description
Heritability and genetic association analysis of cognition in the Diabetes Heart Study.
EBI GWAS Catalog

General gene information

Markers

Homology

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_161201.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript.
    Source sequence(s)
    AC003999
    Related
    ENST00000409974.7
  2. NR_161202.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC003999

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

    Range
    26637871..26647272
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060931.1 Alternate T2T-CHM13v2.0

    Range
    26773589..26782993
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)