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GPRIN3 GPRIN family member 3 [ Homo sapiens (human) ]

Gene ID: 285513, updated on 1-Aug-2020

Summary

Official Symbol
GPRIN3provided by HGNC
Official Full Name
GPRIN family member 3provided by HGNC
Primary source
HGNC:HGNC:27733
See related
Ensembl:ENSG00000185477 MIM:611241
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
GRIN3
Expression
Broad expression in appendix (RPKM 5.7), lymph node (RPKM 5.4) and 24 other tissues See more
Orthologs

Genomic context

See GPRIN3 in Genome Data Viewer
Location:
4q22.1
Exon count:
3
Annotation release Status Assembly Chr Location
109.20200522 current GRCh38.p13 (GCF_000001405.39) 4 NC_000004.12 (89236383..89307800, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (90162427..90229161, complement)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 13 member A Neighboring gene RNA, U6 small nuclear 907, pseudogene Neighboring gene tigger transposable element derived 2 Neighboring gene uncharacterized LOC105377328 Neighboring gene uncharacterized LOC105377329

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • FLJ42625

General protein information

Preferred Names
G protein-regulated inducer of neurite outgrowth 3

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_198281.3NP_938022.2  G protein-regulated inducer of neurite outgrowth 3

    See identical proteins and their annotated locations for NP_938022.2

    Status: VALIDATED

    Source sequence(s)
    AC093862, AC105388
    Consensus CDS
    CCDS34030.1
    UniProtKB/Swiss-Prot
    Q6ZVF9
    Related
    ENSP00000476603.1, ENST00000609438.2
    Conserved Domains (1) summary
    pfam15235
    Location:650771
    GRIN_C; G protein-regulated inducer of neurite outgrowth C-terminus

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109.20200522

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p13 Primary Assembly

    Range
    89236383..89307800 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017008044.1XP_016863533.1  G protein-regulated inducer of neurite outgrowth 3 isoform X1

    UniProtKB/Swiss-Prot
    Q6ZVF9
    Related
    ENSP00000328672.3, ENST00000333209.4
    Conserved Domains (1) summary
    pfam15235
    Location:650771
    GRIN_C; G protein-regulated inducer of neurite outgrowth C-terminus
  2. XM_005262936.3XP_005262993.1  G protein-regulated inducer of neurite outgrowth 3 isoform X1

    See identical proteins and their annotated locations for XP_005262993.1

    UniProtKB/Swiss-Prot
    Q6ZVF9
    Conserved Domains (1) summary
    pfam15235
    Location:650771
    GRIN_C; G protein-regulated inducer of neurite outgrowth C-terminus
  3. XM_005262937.4XP_005262994.1  G protein-regulated inducer of neurite outgrowth 3 isoform X1

    See identical proteins and their annotated locations for XP_005262994.1

    UniProtKB/Swiss-Prot
    Q6ZVF9
    Conserved Domains (1) summary
    pfam15235
    Location:650771
    GRIN_C; G protein-regulated inducer of neurite outgrowth C-terminus
  4. XM_017008043.1XP_016863532.1  G protein-regulated inducer of neurite outgrowth 3 isoform X1

    UniProtKB/Swiss-Prot
    Q6ZVF9
    Conserved Domains (1) summary
    pfam15235
    Location:650771
    GRIN_C; G protein-regulated inducer of neurite outgrowth C-terminus
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