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GPRIN3 GPRIN family member 3 [ Homo sapiens (human) ]

Gene ID: 285513, updated on 6-Nov-2022

Summary

Official Symbol
GPRIN3provided by HGNC
Official Full Name
GPRIN family member 3provided by HGNC
Primary source
HGNC:HGNC:27733
See related
Ensembl:ENSG00000185477 MIM:611241; AllianceGenome:HGNC:27733
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
GRIN3
Summary
Predicted to be involved in neuron projection development. Predicted to be active in plasma membrane. [provided by Alliance of Genome Resources, Apr 2022]
Expression
Broad expression in appendix (RPKM 5.7), lymph node (RPKM 5.4) and 24 other tissues See more
Orthologs
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Genomic context

See GPRIN3 in Genome Data Viewer
Location:
4q22.1
Exon count:
6
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (89236383..89307800, complement)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (92567541..92638966, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (90157534..90228951, complement)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene RNA, U6 small nuclear 907, pseudogene Neighboring gene uncharacterized LOC124900834 Neighboring gene uncharacterized LOC105377328 Neighboring gene uncharacterized LOC124900855

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • FLJ42625

Gene Ontology Provided by GOA

Process Evidence Code Pubs
involved_in neuron projection development IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
G protein-regulated inducer of neurite outgrowth 3

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_198281.3NP_938022.2  G protein-regulated inducer of neurite outgrowth 3

    See identical proteins and their annotated locations for NP_938022.2

    Status: VALIDATED

    Source sequence(s)
    AC093862, AC105388
    Consensus CDS
    CCDS34030.1
    UniProtKB/Swiss-Prot
    Q6ZVF9, Q8IVE4
    Related
    ENSP00000476603.1, ENST00000609438.2
    Conserved Domains (1) summary
    pfam15235
    Location:650771
    GRIN_C; G protein-regulated inducer of neurite outgrowth C-terminus

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

    Range
    89236383..89307800 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017008044.2XP_016863533.1  G protein-regulated inducer of neurite outgrowth 3 isoform X1

    UniProtKB/Swiss-Prot
    Q6ZVF9, Q8IVE4
    Conserved Domains (1) summary
    pfam15235
    Location:650771
    GRIN_C; G protein-regulated inducer of neurite outgrowth C-terminus
  2. XM_047450091.1XP_047306047.1  G protein-regulated inducer of neurite outgrowth 3 isoform X1

    UniProtKB/Swiss-Prot
    Q8IVE4
  3. XM_005262936.4XP_005262993.1  G protein-regulated inducer of neurite outgrowth 3 isoform X1

    See identical proteins and their annotated locations for XP_005262993.1

    UniProtKB/Swiss-Prot
    Q6ZVF9, Q8IVE4
    Conserved Domains (1) summary
    pfam15235
    Location:650771
    GRIN_C; G protein-regulated inducer of neurite outgrowth C-terminus
  4. XM_047450090.1XP_047306046.1  G protein-regulated inducer of neurite outgrowth 3 isoform X1

    UniProtKB/Swiss-Prot
    Q8IVE4
  5. XM_005262937.5XP_005262994.1  G protein-regulated inducer of neurite outgrowth 3 isoform X1

    See identical proteins and their annotated locations for XP_005262994.1

    UniProtKB/Swiss-Prot
    Q6ZVF9, Q8IVE4
    Conserved Domains (1) summary
    pfam15235
    Location:650771
    GRIN_C; G protein-regulated inducer of neurite outgrowth C-terminus
  6. XM_047450089.1XP_047306045.1  G protein-regulated inducer of neurite outgrowth 3 isoform X1

    UniProtKB/Swiss-Prot
    Q8IVE4
  7. XM_017008043.2XP_016863532.1  G protein-regulated inducer of neurite outgrowth 3 isoform X1

    UniProtKB/Swiss-Prot
    Q6ZVF9, Q8IVE4
    Conserved Domains (1) summary
    pfam15235
    Location:650771
    GRIN_C; G protein-regulated inducer of neurite outgrowth C-terminus
  8. XM_047450093.1XP_047306049.1  G protein-regulated inducer of neurite outgrowth 3 isoform X1

    UniProtKB/Swiss-Prot
    Q8IVE4
  9. XM_047450092.1XP_047306048.1  G protein-regulated inducer of neurite outgrowth 3 isoform X1

    UniProtKB/Swiss-Prot
    Q8IVE4
    Related
    ENSP00000328672.3, ENST00000333209.4

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060928.1 Alternate T2T-CHM13v2.0

    Range
    92567541..92638966 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)