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FAM13A-AS1 FAM13A antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 285512, updated on 11-Jun-2021

Summary

Official Symbol
FAM13A-AS1provided by HGNC
Official Full Name
FAM13A antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:19370
See related
Ensembl:ENSG00000248019 MIM:613300
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
FAM13AOS; FAM13A1OS; NCRNA00039
Expression
Ubiquitous expression in fat (RPKM 12.1), thyroid (RPKM 10.8) and 25 other tissues See more
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Genomic context

See FAM13A-AS1 in Genome Data Viewer
Location:
4q22.1
Exon count:
5
Annotation release Status Assembly Chr Location
109.20210514 current GRCh38.p13 (GCF_000001405.39) 4 NC_000004.12 (88709789..88730103)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (89630940..89651254)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene HECT and RLD domain containing E3 ubiquitin protein ligase 3 Neighboring gene RNA, U6 small nuclear 33, pseudogene Neighboring gene nucleosome assembly protein 1 like 5 Neighboring gene HNF1 motif-containing MPRA enhancer 87 Neighboring gene family with sequence similarity 13 member A Neighboring gene uncharacterized LOC105377327

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Markers

Other Names

  • FAM13A antisense RNA 1 (non-protein coding)
  • FAM13A opposite strand (non-protein coding)
  • FAM13A1 opposite strand (non-protein coding)
  • family with sequence similarity 13, member A1 opposite strand

Clone Names

  • FLJ36331

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_002806.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AK126217, DB305148
    Related
    ENST00000500765.1

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20210514

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p13 Primary Assembly

    Range
    88709789..88730103
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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