Format

Send to:

Choose Destination

LINC00877 long intergenic non-protein coding RNA 877 [ Homo sapiens (human) ]

Gene ID: 285286, updated on 23-Nov-2021

Summary

Official Symbol
LINC00877provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 877provided by HGNC
Primary source
HGNC:HGNC:27706
See related
Ensembl:ENSG00000241163
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Broad expression in lymph node (RPKM 1.5), appendix (RPKM 1.5) and 15 other tissues See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See LINC00877 in Genome Data Viewer
Location:
3p13
Exon count:
7
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 3 NC_000003.12 (72035519..72100455, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (72084670..72149606, complement)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105377157 Neighboring gene UBE2Q2 pseudogene 9 Neighboring gene coiled-coil domain containing 137 pseudogene Neighboring gene long intergenic non-protein coding RNA 870 Neighboring gene Sharpr-MPRA regulatory region 12200

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Phenotypes

EBI GWAS Catalog

Description
A genome-wide search for common SNP x SNP interactions on the risk of venous thrombosis.
EBI GWAS Catalog

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_104116.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC105265, AK097190, DA590669
    Related
    ENST00000468646.6

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p13 Primary Assembly

    Range
    72035519..72100455 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Support Center