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TMEM272 transmembrane protein 272 [ Homo sapiens (human) ]

Gene ID: 283521, updated on 17-May-2023

Summary

Official Symbol
TMEM272provided by HGNC
Official Full Name
transmembrane protein 272provided by HGNC
Primary source
HGNC:HGNC:26737
See related
Ensembl:ENSG00000281106 AllianceGenome:HGNC:26737
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
LINC00282; NCRNA00282
Summary
Predicted to be integral component of membrane. [provided by Alliance of Genome Resources, Apr 2022]
Expression
Low expression observed in reference dataset See more
Orthologs
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Genomic context

See TMEM272 in Genome Data Viewer
Location:
13q14.3
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_03 current GRCh38.p14 (GCF_000001405.40) 13 NC_000013.11 (51813347..51934366, complement)
RS_2023_03 current T2T-CHM13v2.0 (GCF_009914755.1) 13 NC_060937.1 (51028047..51149036, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 13 NC_000013.10 (52387483..52419313, complement)

Chromosome 13 - NC_000013.11Genomic Context describing neighboring genes Neighboring gene WD repeat and FYVE domain containing 2 Neighboring gene uncharacterized LOC124903177 Neighboring gene dehydrogenase/reductase 12 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr13:52371189-52371717 Neighboring gene uncharacterized LOC107984561 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:52423314-52423814 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr13:52435707-52436906 Neighboring gene coiled-coil domain containing 70 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr13:52501865-52503064 Neighboring gene CTAGE family member 3, pseudogene Neighboring gene ATPase copper transporting beta Neighboring gene Sharpr-MPRA regulatory region 15635 Neighboring gene fatty acid binding protein 5 pseudogene 2

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General protein information

Preferred Names
transmembrane protein 272
Names
long intergenic non-protein coding RNA 282

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001351003.2NP_001337932.1  transmembrane protein 272 isoform 1

    Status: VALIDATED

    Source sequence(s)
    AL162377, BM661920, DA339105
    Consensus CDS
    CCDS86353.1
    UniProtKB/Swiss-Prot
    A0A1B0GW01
    Related
    ENSP00000490718.2, ENST00000629372.3
  2. NM_001351005.2NP_001337934.1  transmembrane protein 272 isoform 3

    Status: VALIDATED

    Source sequence(s)
    AL162377, BM661920, DA226291
  3. NM_001351006.2NP_001337935.1  transmembrane protein 272 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AL162377, BM661920, DA338627

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000013.11 Reference GRCh38.p14 Primary Assembly

    Range
    51813347..51934366 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047430278.1XP_047286234.1  transmembrane protein 272 isoform X1

  2. XM_047430280.1XP_047286236.1  transmembrane protein 272 isoform X2

    UniProtKB/Swiss-Prot
    A0A1B0GW01
  3. XM_047430279.1XP_047286235.1  transmembrane protein 272 isoform X2

    UniProtKB/Swiss-Prot
    A0A1B0GW01
  4. XM_047430281.1XP_047286237.1  transmembrane protein 272 isoform X3

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060937.1 Alternate T2T-CHM13v2.0

    Range
    51028047..51149036 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054374472.1XP_054230447.1  transmembrane protein 272 isoform X1

  2. XM_054374474.1XP_054230449.1  transmembrane protein 272 isoform X2

    UniProtKB/Swiss-Prot
    A0A1B0GW01
  3. XM_054374473.1XP_054230448.1  transmembrane protein 272 isoform X2

    UniProtKB/Swiss-Prot
    A0A1B0GW01
  4. XM_054374475.1XP_054230450.1  transmembrane protein 272 isoform X3

  5. XM_054374471.1XP_054230446.1  transmembrane protein 272 isoform X4

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_178515.2: Suppressed sequence

    Description
    NM_178515.2: This RefSeq was permanently suppressed because it is now thought that this gene does not encode a protein.