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NUTM2E NUT family member 2E [ Homo sapiens (human) ]

Gene ID: 283008, updated on 17-Jun-2024

Summary

Official Symbol
NUTM2Eprovided by HGNC
Official Full Name
NUT family member 2Eprovided by HGNC
Primary source
HGNC:HGNC:23448
See related
Ensembl:ENSG00000228570 AllianceGenome:HGNC:23448
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
FAM22E
Annotation information
Note: This gene contains an intact open reading frame; however, it is classified as a pseudogene because no transcripts available as of August 2009 are thought to originate from this location, suggesting that this gene does not have a functional promoter. [26 Aug 2009]
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Genomic context

See NUTM2E in Genome Data Viewer
Location:
10q22.3
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (79826739..79850878)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (80696083..80720226)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (81586495..81610634)

Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:81443548-81444475 Neighboring gene BEN domain containing 3 pseudogene 3 Neighboring gene NUTM2B antisense RNA 1 Neighboring gene NUT family member 2B Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:81471387-81471887 Neighboring gene H3K27ac hESC enhancer GRCh37_chr10:81585381-81585979 Neighboring gene uncharacterized LOC642361 Neighboring gene putative UPF0607 protein FLJ37424 pseudogene Neighboring gene nuclear pore associated protein 1 pseudogene 2

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General protein information

Preferred Names
nUT family member 2E
Names
family with sequence similarity 22, member E

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001355263.2NP_001342192.1  nUT family member 2E

    Status: VALIDATED

    Source sequence(s)
    AL135925
    Consensus CDS
    CCDS91285.1
    UniProtKB/Swiss-Prot
    A6NHL0, B1AL46
    Related
    ENSP00000407521.2, ENST00000429984.5
    Conserved Domains (1) summary
    pfam12881
    Location:136875
    NUT; NUT protein

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

    Range
    79826739..79850878
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060934.1 Alternate T2T-CHM13v2.0

    Range
    80696083..80720226
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NG_012781.1: Suppressed sequence

    Description
    NG_012781.1: This RefSeq was removed because it is now thought that this locus is a transcribed gene.