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IGKV1-5 immunoglobulin kappa variable 1-5 [ Homo sapiens (human) ]

Gene ID: 28299, updated on 8-Jul-2021

Summary

Official Symbol
IGKV1-5provided by HGNC
Official Full Name
immunoglobulin kappa variable 1-5provided by HGNC
Primary source
HGNC:HGNC:5741
See related
Ensembl:ENSG00000243466 IMGT/GENE-DB:IGKV1-5
Gene type
other
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
V1; L12; IGKV; L12a; IGKV15
Annotation information
Annotation category: partial on reference assembly
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Genomic context

See IGKV1-5 in Genome Data Viewer
Location:
2p11.2
Annotation release Status Assembly Chr Location
109.20210514 current GRCh38.p13 (GCF_000001405.39) 2 NC_000002.12 (88947301..88947776, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (89246819..89247294, complement)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene piggyBac transposable element derived 4 pseudogene 5 Neighboring gene immunoglobulin kappa variable 2-4 (pseudogene) Neighboring gene immunoglobulin kappa locus Neighboring gene immunoglobulin kappa variable 1-6 Neighboring gene immunoglobulin kappa variable 3-7 (non-functional)

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Other Names

  • Ig kappa chain V-region

Clone Names

  • MGC22745, MGC32715, MGC88810

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables antigen binding NAS
Non-traceable Author Statement
more info
PubMed 
Process Evidence Code Pubs
involved_in adaptive immune response IEA
Inferred from Electronic Annotation
more info
 
involved_in immune response IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in immune response NAS
Non-traceable Author Statement
more info
PubMed 
involved_in immunoglobulin production IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
located_in blood microparticle HDA PubMed 
located_in extracellular exosome HDA PubMed 
located_in extracellular region NAS
Non-traceable Author Statement
more info
PubMed 
located_in extracellular region TAS
Traceable Author Statement
more info
 
is_active_in extracellular space IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
part_of immunoglobulin complex IEA
Inferred from Electronic Annotation
more info
 
located_in plasma membrane TAS
Traceable Author Statement
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_000834.1 

    Range
    393909..394384
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20210514

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p13 Primary Assembly

    Range
    88947301..88947776 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p13 PATCHES

Genomic

  1. NW_012132915.1 Reference GRCh38.p13 PATCHES

    Range
    56127..56602 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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