U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

MGG_03850 DNA polymerase epsilon catalytic subunit A [ Pyricularia oryzae 70-15 ]

Gene ID: 2677352, updated on 17-May-2024

Summary

Go to the top of the page Help
Gene symbol
MGG_03850
Gene description
DNA polymerase epsilon catalytic subunit A
Locus tag
MGG_03850
See related
FungiDB:MGG_03850; VEuPathDB:MGG_03850
Gene type
protein coding
RNA name
DNA polymerase epsilon catalytic subunit A
RefSeq status
PROVISIONAL
Organism
Pyricularia oryzae 70-15 (strain: 70-15)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Magnaporthales; Pyriculariaceae; Pyricularia
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 6
Exon count:
3
Sequence:
Chromosome: 6; NC_017853.1 (2823301..2830782)

Chromosome 6 - NC_017853.1Genomic Context describing neighboring genes Neighboring gene DNA ligase 1 Neighboring gene aldose 1-epimerase Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene C6 transcription factor

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_017853.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. The genome sequence of the rice blast fungus Magnaporthe grisea. Dean RA, et al. Nature, 2005 Apr 21. PMID 15846337

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-directed DNA polymerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleotide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables single-stranded DNA 3'-5' DNA exonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA replication IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in DNA replication proofreading IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in base-excision repair, gap-filling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in leading strand elongation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitotic cell cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nucleotide-excision repair, DNA gap filling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of epsilon DNA polymerase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
DNA polymerase epsilon catalytic subunit A

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_017853.1 Reference assembly

    Range
    2823301..2830782
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003719993.1 → XP_003720041.1  DNA polymerase epsilon catalytic subunit A [Pyricularia oryzae 70-15]

    See identical proteins and their annotated locations for XP_003720041.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A4P7NR92, A0AA97PM35, G4NHG4, L7IW56
    Conserved Domains (5) summary
    cd05779
    Location:287 → 490
    DNA_polB_epsilon_exo; DEDDy 3'-5' exonuclease domain of eukaryotic DNA polymerase epsilon, a family-B DNA polymerase
    cd05535
    Location:549 → 1169
    POLBc_epsilon; DNA polymerase type-B epsilon subfamily catalytic domain. Three DNA-dependent DNA polymerases type B (alpha, delta, and epsilon) have been identified as essential for nuclear DNA replication in eukaryotes. DNA polymerase (Pol) epsilon has been proposed ...
    smart00486
    Location:287 → 885
    POLBc; DNA polymerase type-B family
    pfam03104
    Location:102 → 446
    DNA_pol_B_exo1; DNA polymerase family B, exonuclease domain
    pfam08490
    Location:1531 → 1924
    DUF1744; Domain of unknown function (DUF1744)
Protein Accession Links
GenPept Link UniProtKB Link
EHA47674.1

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials