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BRD3OS BRD3 opposite strand [ Homo sapiens (human) ]

Gene ID: 266655, updated on 13-Mar-2020

Summary

Official Symbol
BRD3OSprovided by HGNC
Official Full Name
BRD3 opposite strandprovided by HGNC
Primary source
HGNC:HGNC:24742
See related
Ensembl:ENSG00000235106
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
LP2477; LINC00094; NCRNA00094
Expression
Ubiquitous expression in brain (RPKM 8.3), thyroid (RPKM 6.5) and 25 other tissues See more
Orthologs

Genomic context

See BRD3OS in Genome Data Viewer
Location:
9q34.2
Exon count:
4
Annotation release Status Assembly Chr Location
109.20200228 current GRCh38.p13 (GCF_000001405.39) 9 NC_000009.12 (134025476..134031587)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (136890561..136896719)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene SARDH intron CAGE-defined T cell enhancer Neighboring gene sarcosine dehydrogenase Neighboring gene vav guanine nucleotide exchange factor 2 Neighboring gene uncharacterized LOC100130548 Neighboring gene bromodomain containing 3 Neighboring gene ADP ribosylation factor 4 pseudogene 1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • FLJ35348

General protein information

Preferred Names
putative uncharacterized protein BRD3OS
Names
BRD3 opposite strand protein
long intergenic non-protein coding RNA 94

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001355256.2NP_001342185.1  putative uncharacterized protein BRD3OS

    Status: VALIDATED

    Source sequence(s)
    AL445931
    Consensus CDS
    CCDS87707.1
    Related
    ENSP00000490916.1, ENST00000603928.3

RNA

  1. NR_149319.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL445931

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p13 Primary Assembly

    Range
    134025476..134031587
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NR_002800.1: Suppressed sequence

    Description
    NR_002800.1: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript.
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