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Psmb3 proteasome (prosome, macropain) subunit, beta type 3 [ Mus musculus (house mouse) ]

Gene ID: 26446, updated on 8-Jul-2018
Official Symbol
Psmb3provided by MGI
Official Full Name
proteasome (prosome, macropain) subunit, beta type 3provided by MGI
Primary source
MGI:MGI:1347014
See related
Ensembl:ENSMUSG00000069744 Vega:OTTMUSG00000002743
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
C10-II; AL033320
Expression
Ubiquitous expression in large intestine adult (RPKM 174.6), kidney adult (RPKM 115.8) and 28 other tissues See more
Orthologs
See Psmb3 in Genome Data Viewer
Location:
11 D; 11 61.07 cM
Exon count:
6
Annotation release Status Assembly Chr Location
106 current GRCm38.p4 (GCF_000001635.24) 11 NC_000077.6 (97703434..97713500)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 11 NC_000077.5 (97564748..97574814)

Chromosome 11 - NC_000077.6Genomic Context describing neighboring genes Neighboring gene polycomb group ring finger 2 Neighboring gene nuclear encoded tRNA asparagine 8 (anticodon GTT) Neighboring gene phosphatidylinositol-5-phosphate 4-kinase, type II, beta Neighboring gene microRNA 8102

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a
Products Interactant Other Gene Complex Source Pubs Description

Markers

Homology

Clone Names

  • MGC106850

Gene Ontology Provided by MGI

Function Evidence Code Pubs
endopeptidase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
endopeptidase activity ISO
Inferred from Sequence Orthology
more info
PubMed 
hydrolase activity IEA
Inferred from Electronic Annotation
more info
 
peptidase activity IEA
Inferred from Electronic Annotation
more info
 
threonine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
proteasomal protein catabolic process IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
proteasomal ubiquitin-independent protein catabolic process IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
proteasome-mediated ubiquitin-dependent protein catabolic process IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 
protein catabolic process TAS
Traceable Author Statement
more info
PubMed 
proteolysis IEA
Inferred from Electronic Annotation
more info
 
proteolysis involved in cellular protein catabolic process IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
cytoplasm IEA
Inferred from Electronic Annotation
more info
 
nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
nucleus IEA
Inferred from Electronic Annotation
more info
 
proteasome complex ISO
Inferred from Sequence Orthology
more info
 
proteasome core complex IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
proteasome core complex IDA
Inferred from Direct Assay
more info
PubMed 
proteasome core complex, beta-subunit complex IEA
Inferred from Electronic Annotation
more info
 
Preferred Names
proteasome subunit beta type-3
Names
proteasome chain 13
proteasome component C10-II
proteasome theta chain
NP_036101.1

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_011971.4NP_036101.1  proteasome subunit beta type-3

    See identical proteins and their annotated locations for NP_036101.1

    Status: PROVISIONAL

    Source sequence(s)
    AL596123
    Consensus CDS
    CCDS25328.1
    UniProtKB/Swiss-Prot
    Q9R1P1
    UniProtKB/TrEMBL
    Q545G0
    Related
    ENSMUSP00000099436.4, OTTMUSP00000002595, ENSMUST00000103147.4, OTTMUST00000005449
    Conserved Domains (1) summary
    cd03759
    Location:6201
    proteasome_beta_type_3; proteasome beta type-3 subunit. The 20S proteasome, multisubunit proteolytic complex, is the central enzyme of nonlysosomal protein degradation in both the cytosol and nucleus. It is composed of 28 subunits arranged as four homoheptameric rings that ...

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p4 C57BL/6J

Genomic

  1. NC_000077.6 Reference GRCm38.p4 C57BL/6J

    Range
    97703434..97713500
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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