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Psg19 pregnancy specific beta-1-glycoprotein 19 [ Mus musculus (house mouse) ]

Gene ID: 26439, updated on 9-Dec-2022

Summary

Official Symbol
Psg19provided by MGI
Official Full Name
pregnancy specific beta-1-glycoprotein 19provided by MGI
Primary source
MGI:MGI:1347252
See related
Ensembl:ENSMUSG00000004542 AllianceGenome:MGI:1347252
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
CGM7; Cea4; Cea-4
Summary
Predicted to be involved in phagocytosis. Is expressed in labyrinthine zone and spongiotrophoblast. Orthologous to human CEACAM21 (CEA cell adhesion molecule 21) and CEACAM4 (CEA cell adhesion molecule 4). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Restricted expression toward placenta adult (RPKM 50.9) See more
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Genomic context

See Psg19 in Genome Data Viewer
Location:
7 A3; 7 9.31 cM
Exon count:
5
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (18523045..18532471, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (18789120..18798546, complement)

Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene pregnancy-specific beta-1-glycoprotein 22 Neighboring gene predicted gene, 24464 Neighboring gene synaptonemal complex protein 1, pseudogene 1 Neighboring gene carcinoembryonic antigen-related cell adhesion molecule 1 pseudogene Neighboring gene pregnancy specific beta-1-glycoprotein 17

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (1) 

General gene information

Markers

Clone Names

  • MGC117673

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in T cell activation IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
located_in apical plasma membrane ISO
Inferred from Sequence Orthology
more info
 
is_active_in cellular_component ND
No biological Data available
more info
 
located_in cytosol ISO
Inferred from Sequence Orthology
more info
 
is_active_in external side of plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in plasma membrane ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
pregnancy specific glycoprotein 19
Names
carcinoembryonic antigen 4

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_011964.2NP_036094.2  pregnancy specific glycoprotein 19

    See identical proteins and their annotated locations for NP_036094.2

    Status: VALIDATED

    Source sequence(s)
    AA408180, AK145915, AV034276, BC099467
    Consensus CDS
    CCDS20877.1
    UniProtKB/TrEMBL
    Q4KL31
    Related
    ENSMUSP00000004657.7, ENSMUST00000004657.14
    Conserved Domains (3) summary
    cd05774
    Location:276380
    Ig_CEACAM_D1; First immunoglobulin (Ig)-like domain of carcinoembryonic antigen (CEA) related cell adhesion molecule (CEACAM)
    smart00408
    Location:400461
    IGc2; Immunoglobulin C-2 Type
    smart00410
    Location:395472
    IG_like; Immunoglobulin like

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000073.7 Reference GRCm39 C57BL/6J

    Range
    18523045..18532471 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006540007.4XP_006540070.1  pregnancy specific glycoprotein 19 isoform X1

    Conserved Domains (2) summary
    smart00408
    Location:276337
    IGc2; Immunoglobulin C-2 Type
    cd05774
    Location:152256
    Ig_CEACAM_D1; First immunoglobulin (Ig)-like domain of carcinoembryonic antigen (CEA) related cell adhesion molecule (CEACAM)