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Or14j9 olfactory receptor family 14 subfamily J member 9 [ Mus musculus (house mouse) ]

Gene ID: 258096, updated on 17-Aug-2024

Summary

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Official Symbol
Or14j9provided by MGI
Official Full Name
olfactory receptor family 14 subfamily J member 9provided by MGI
Primary source
MGI:MGI:2177495
See related
Ensembl:ENSMUSG00000051611 AllianceGenome:MGI:2177495
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Olfr112; MOR218-4; 4930580F03Rik
Summary
Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
Expression
Restricted expression toward testis adult (RPKM 3.3) See more
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Genomic context

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Location:
17 B1; 17 19.16 cM
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 17 NC_000083.7 (37874031..37880342, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 17 NC_000083.6 (37563140..37569451, complement)

Chromosome 17 - NC_000083.7Genomic Context describing neighboring genes Neighboring gene olfactory receptor family 5 subfamily V member 1B Neighboring gene STARR-seq mESC enhancer starr_42511 Neighboring gene STARR-seq mESC enhancer starr_42513 Neighboring gene predicted gene, 54003 Neighboring gene STARR-seq mESC enhancer starr_42514 Neighboring gene olfactory receptor family 14 subfamily J member 2 Neighboring gene olfactory receptor family 14 subfamily J member 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Co-duplication of olfactory receptor and MHC class I genes in the mouse major histocompatibility complex. Amadou C, et al. Hum Mol Genet, 2003 Nov 15. PMID 14506126
  2. The olfactory receptor gene superfamily of the mouse. Zhang X, et al. Nat Neurosci, 2002 Feb. PMID 11802173
  3. Different evolutionary processes shaped the mouse and human olfactory receptor gene families. Young JM, et al. Hum Mol Genet, 2002 Mar 1. PMID 11875048
  4. Odorant receptor expressed sequence tags demonstrate olfactory expression of over 400 genes, extensive alternate splicing and unequal expression levels. Young JM, et al. Genome Biol, 2003. PMID 14611657, Free PMC Article
  5. A unified nomenclature for vertebrate olfactory receptors. Olender T, et al. BMC Evol Biol, 2020 Apr 15. PMID 32295537, Free PMC Article

See all (14) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables odorant binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables olfactory receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables olfactory receptor activity ISA
Inferred from Sequence Alignment
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within G protein-coupled receptor signaling pathway ISA
Inferred from Sequence Alignment
more info
 PubMed 
acts_upstream_of_or_within sensory perception of smell ISA
Inferred from Sequence Alignment
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane ISA
Inferred from Sequence Alignment
more info
 PubMed 

General protein information

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Preferred Names
olfactory receptor 112
Names
GA_x6K02T2PSCP-2023769-2022807

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001013575.5 → NP_001013593.2  olfactory receptor 112

    See identical proteins and their annotated locations for NP_001013593.2

    Status: VALIDATED

    Source sequence(s)
    CR974439
    Consensus CDS
    CCDS28756.1
    UniProtKB/TrEMBL
    Q7TRK0, Q8C0S2
    Related
    ENSMUSP00000133654.2, ENSMUST00000174798.3
    Conserved Domains (1) summary
    cd15227
    Location:25 → 294
    7tmA_OR14-like; olfactory receptor family 14 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000083.7 Reference GRCm39 C57BL/6J

    Range
    37874031..37880342 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011246462.3 → XP_011244764.1  olfactory receptor 112 isoform X1

    See identical proteins and their annotated locations for XP_011244764.1

    UniProtKB/TrEMBL
    Q7TRK0, Q8C0S2
    Related
    ENSMUSP00000150904.2, ENSMUST00000213274.2
    Conserved Domains (1) summary
    cd15227
    Location:25 → 294
    7tmA_OR14-like; olfactory receptor family 14 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors
Nucleotide Protein Strain
Heading Accession and Version

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