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MNEG_1995 beta-ketoacyl synthase [ Monoraphidium neglectum ]

Gene ID: 25734873, updated on 28-Dec-2023

Summary

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Gene symbol
MNEG_1995
Gene description
beta-ketoacyl synthase
Locus tag
MNEG_1995
Gene type
protein coding
RNA name
beta-ketoacyl synthase
RefSeq status
PROVISIONAL
Organism
Monoraphidium neglectum (strain: SAG 48.87)
Lineage
Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Selenastraceae; Monoraphidium
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Genomic context

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Location:
chromosome: Unknown
Exon count:
21

NW_014013414.1Genomic Context describing neighboring genes Neighboring gene polyketide synthase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_014013414.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Reconstruction of the lipid metabolism for the microalga Monoraphidium neglectum from its genome sequence reveals characteristics suitable for biofuel production. Bogen C, et al. BMC Genomics, 2013 Dec 28. PMID 24373495, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3-oxoacyl-[acyl-carrier-protein] synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables fatty acid synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphopantetheine binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
beta-ketoacyl synthase
XP_013904981.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_014013414.1 Reference assembly

    Range
    78..17955 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014049527.1 → XP_013904981.1  beta-ketoacyl synthase [Monoraphidium neglectum]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0D2N079
    Conserved Domains (7) summary
    cd05195
    Location:1894 → 2180
    enoyl_red; enoyl reductase of polyketide synthase
    smart00822
    Location:2196 → 2374
    PKS_KR; This enzymatic domain is part of bacterial polyketide synthases
    smart00823
    Location:759 → 837
    PKS_PP; Phosphopantetheine attachment site
    smart00829
    Location:1899 → 2180
    PKS_ER; Enoylreductase
    COG3321
    Location:920 → 1332
    PksD; Acyl transferase domain in polyketide synthase (PKS) enzymes [Secondary metabolites biosynthesis, transport and catabolism]
    cd00833
    Location:920 → 1322
    PKS; polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or ...
    cl21454
    Location:483 → 624
    NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
Nucleotide Protein
Heading Accession and Version

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