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vma7 V-type ATPase V1 subunit F [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2540982, updated on 18-Sep-2024

Summary

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Official Symbol
vma7
Official Full Name
V-type ATPase V1 subunit F
Primary source
PomBase:SPBC3B9.18c
Locus tag
SPOM_SPBC3B9.18C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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Location:
chromosome: II
Exon count:
2
Sequence:
Chromosome: II; NC_003423.3 (4021130..4021849, complement)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene nucleoporin, WD repeat Nup120 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Fe-sulfur protein Isa2 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene GrpE domain-containing chaperone mge1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A Proteome-wide Fission Yeast Interactome Reveals Network Evolution Principles from Yeasts to Human. Vo TV, et al. Cell, 2016 Jan 14. PMID 26771498, Free PMC Article
  2. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
  3. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360
  4. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables ATP hydrolysis activity IC
Inferred by Curator
more info
  
enables proton-transporting ATPase activity, rotational mechanism ISO
Inferred from Sequence Orthology
more info
  
Process Evidence Code Pubs
involved_in proton transmembrane transport IC
Inferred by Curator
more info
  
Component Evidence Code Pubs
is_active_in cytosol HDA PubMed 
is_active_in fungal-type vacuole membrane ISO
Inferred from Sequence Orthology
more info
  
is_active_in membrane IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in nucleus HDA PubMed 
part_of vacuolar proton-transporting V-type ATPase, V1 domain ISO
Inferred from Sequence Orthology
more info
  

General protein information

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Preferred Names
V-type ATPase V1 subunit F

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    4021130..4021849 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001022598.3 → NP_596676.1  V-type ATPase V1 subunit F [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_596676.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O43046
    Conserved Domains (1) summary
    cl00632
    Location:8 → 120
    ATP-synt_F; ATP synthase (F/14-kDa) subunit
Nucleotide Protein
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