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trp1 anthranilate synthase component II [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2539973, updated on 18-Sep-2024

Summary

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Official Symbol
trp1
Official Full Name
anthranilate synthase component II
Primary source
PomBase:SPBC1539.09c
Locus tag
SPOM_SPBC1539.09C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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Location:
chromosome: II
Exon count:
1
Sequence:
Chromosome: II; NC_003423.3 (4377221..4379581, complement)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene glutathione-dependent formaldehyde dehydrogenase Neighboring gene ncRNA Neighboring gene ADP-ribosylation factor-like protein Arf6 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ribosome biogenesis protein Nop16

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Organisation of the complex locus trp1 in the fission yeast Schizosaccharomyces pombe. Thuriaux P, et al. Curr Genet, 1982 Oct. PMID 24186364
  2. Megadalton-node assembly by binding of Skb1 to the membrane anchor Slf1. Deng L, et al. Mol Biol Cell, 2014 Sep 1. PMID 25009287, Free PMC Article
  3. Caffeine-resistance in S. pombe: mutations in three novel caf genes increase caffeine tolerance and affect radiation sensitivity, fertility, and cell cycle. Benko Z, et al. Curr Genet, 1997 Jun. PMID 9211790
  4. Dual recruitment of Cdc48 (p97)-Ufd1-Npl4 ubiquitin-selective segregase by small ubiquitin-like modifier protein (SUMO) and ubiquitin in SUMO-targeted ubiquitin ligase-mediated genome stability functions. Nie M, et al. J Biol Chem, 2012 Aug 24. PMID 22730331, Free PMC Article
  5. Characterization of Mug33 reveals complementary roles for actin cable-dependent transport and exocyst regulators in fission yeast exocytosis. Snaith HA, et al. J Cell Sci, 2011 Jul 1. PMID 21652630, Free PMC Article

See all (9) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables anthranilate synthase activity IMP
Inferred from Mutant Phenotype
more info
 PubMed 
enables indole-3-glycerol-phosphate lyase activity IMP
Inferred from Mutant Phenotype
more info
 PubMed 
enables indole-3-glycerol-phosphate synthase activity IEA
Inferred from Electronic Annotation
more info
  
enables phosphoribosylanthranilate isomerase activity IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Process Evidence Code Pubs
involved_in tryptophan biosynthetic process IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in tryptophan biosynthetic process IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
part_of anthranilate synthase complex ISO
Inferred from Sequence Orthology
more info
  
is_active_in cytosol HDA PubMed 

General protein information

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Preferred Names
anthranilate synthase component II

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    4377221..4379581 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001023843.2 → NP_596823.1  anthranilate synthase component II [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_596823.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q92370, Q9UUF5
    Conserved Domains (5) summary
    COG0512
    Location:28 → 216
    PabA; Anthranilate/para-aminobenzoate synthase component II [Amino acid transport and metabolism, Coenzyme transport and metabolism]
    PRK05670
    Location:28 → 218
    PRK05670; anthranilate synthase component II; Provisional
    PRK09427
    Location:252 → 758
    PRK09427; bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase; Provisional
    cd00405
    Location:537 → 756
    PRAI; Phosphoribosylanthranilate isomerase (PRAI) catalyzes the fourth step of the tryptophan biosynthesis, the conversion of N-(5'- phosphoribosyl)-anthranilate (PRA) to 1-(o-carboxyphenylamino)- 1-deoxyribulose 5-phosphate (CdRP). Most PRAIs are monomeric, ...
    pfam00218
    Location:258 → 517
    IGPS; Indole-3-glycerol phosphate synthase
Nucleotide Protein
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