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CRMA cardiomyocyte maturation associated lncRNA [ Homo sapiens (human) ]

Gene ID: 253868, updated on 25-Jan-2022

Summary

Official Symbol
CRMAprovided by HGNC
Official Full Name
cardiomyocyte maturation associated lncRNAprovided by HGNC
Primary source
HGNC:HGNC:26393
See related
AllianceGenome:HGNC:26393
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
CARMA; C20orf200; NCRNA00335; MIR1-1HG-AS1; C20orf166-AS1
Expression
Biased expression in heart (RPKM 4.0), prostate (RPKM 2.7) and 8 other tissues See more
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Genomic context

See CRMA in Genome Data Viewer
Location:
20q13.33
Exon count:
7
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 20 NC_000020.11 (62543070..62551561, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 20 NC_000020.10 (61141438..61148768, complement)

Chromosome 20 - NC_000020.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105372711 Neighboring gene uncharacterized LOC105376995 Neighboring gene MIR1-1 host gene Neighboring gene microRNA 1-1 Neighboring gene microRNA 133a-2

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Phenotypes

EBI GWAS Catalog

Description
Identification of 23 new prostate cancer susceptibility loci using the iCOGS custom genotyping array.
EBI GWAS Catalog

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Other Names

  • C20orf166 antisense RNA 1 (non-protein coding)
  • MIR1-1HG antisense RNA 1

Clone Names

  • FLJ30313, MGC138143, DKFZp313D1938

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_033263.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC161429, AK056546, AL449263, AL832097, DA722400

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000020.11 Reference GRCh38.p13 Primary Assembly

    Range
    62543070..62551561 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_152757.1: Suppressed sequence

    Description
    NM_152757.1: This RefSeq was permanently suppressed because currently there is insufficient support for the protein.
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